Best Alignments for T0372

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mk4A/T0372-1mk4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mk4A/T0372-1mk4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3134e-021.75e-15 d.108.1.1
1ne9A/T0372-1ne9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ne9A/T0372-1ne9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9592e-026.53e-35 d.108.1.4
d.108.1.4
2fe7A/T0372-2fe7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe7A/T0372-2fe7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8317e-011.37e-16
1sqhA/T0372-1sqhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqhA/T0372-1sqhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8918e-013.99e-26 d.108.1.5
2ge3A/T0372-2ge3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ge3A/T0372-2ge3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0741e+001.97e-15
2c27A/T0372-2c27A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c27A/T0372-2c27A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1257e+006.18e-23
1wwzA/T0372-1wwzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwzA/T0372-1wwzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3072e+005.52e-12
2d4pA/T0372-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0372-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1600e+002.80e-08
1zosA/T0372-1zosA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zosA/T0372-1zosA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2922e+006.15e-18
1dc1A/T0372-1dc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dc1A/T0372-1dc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5768e+001.15e-12 1dc1A c.52.1.11

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001