Best Alignments for T0372

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1mk4A/T0372-1mk4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mk4A/T0372-1mk4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6198e-041.49e-25 d.108.1.1
1ne9A/T0372-1ne9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ne9A/T0372-1ne9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0114e-041.12e-46 d.108.1.4
d.108.1.4
1z4eA/T0372-1z4eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z4eA/T0372-1z4eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4339e-022.48e-23
2fe7A/T0372-2fe7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe7A/T0372-2fe7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6604e-025.30e-24
2ge3A/T0372-2ge3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ge3A/T0372-2ge3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7915e-026.80e-24
2d4pA/T0372-2d4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0372-2d4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4512e-026.71e-20
2aj6A/T0372-2aj6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aj6A/T0372-2aj6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5751e-011.24e-11
1sqhA/T0372-1sqhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sqhA/T0372-1sqhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6277e-014.74e-33 d.108.1.5
1wwzA/T0372-1wwzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwzA/T0372-1wwzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3021e-011.46e-15
1yvoA/T0372-1yvoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yvoA/T0372-1yvoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3366e-011.84e-18

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001