Best Alignments for T0372

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2d4pA/T0372-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0372-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5939e+005.00e-13
1vc1A/T0372-1vc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vc1A/T0372-1vc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7093e+002.61e-11 c.13.2.1
1z4rA/T0372-1z4rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z4rA/T0372-1z4rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1304e+004.39e-10
2bswA/T0372-2bswA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bswA/T0372-2bswA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2239e+004.96e-15
1rxyA/T0372-1rxyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxyA/T0372-1rxyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3259e+007.22e-09 c.56.2.1
1vhsA/T0372-1vhsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhsA/T0372-1vhsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7093e+002.08e-10 d.108.1.1
1pjcA/T0372-1pjcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pjcA/T0372-1pjcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7107e+001.54e-06 1sayA c.2.1.4
c.23.12.2
2fg9A/T0372-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0372-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5947e+006.90e-07
1zbfA/T0372-1zbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zbfA/T0372-1zbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1413e+013.36e-05
1nv8A/T0372-1nv8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nv8A/T0372-1nv8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2853e+011.53e-10 c.66.1.30

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001