Best Alignments for T0372

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2d4pA/T0372-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0372-2d4pA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6777e+005.00e-13
1vc1A/T0372-1vc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vc1A/T0372-1vc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4227e+003.63e-11 c.13.2.1
2fg9A/T0372-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0372-2fg9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1846e+006.90e-07
1kt8A/T0372-1kt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kt8A/T0372-1kt8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4597e+008.48e-07 e.17.1.1
1bl3A/T0372-1bl3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bl3A/T0372-1bl3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5730e+002.02e-10 1b9dA c.55.3.2
1id1A/T0372-1id1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1id1A/T0372-1id1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0299e+012.72e-08 1id1A c.2.1.9
1yvkA/T0372-1yvkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yvkA/T0372-1yvkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1928e+017.93e-12
1pjbA/T0372-1pjbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pjbA/T0372-1pjbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2385e+011.60e-04 1sayA c.2.1.4
c.23.12.2
1vk1A/T0372-1vk1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vk1A/T0372-1vk1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2496e+011.96e-01 d.268.1.2
2bswA/T0372-2bswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bswA/T0372-2bswA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2834e+011.71e-12

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001