Best Alignments for T0372

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2d4pA/T0372-2d4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d4pA/T0372-2d4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9269e-011.85e-10
1z4rA/T0372-1z4rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z4rA/T0372-1z4rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0645e+007.87e-10
1vc1A/T0372-1vc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vc1A/T0372-1vc1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1070e+002.61e-11 c.13.2.1
1zbfA/T0372-1zbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zbfA/T0372-1zbfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1782e+003.36e-05
1rxyA/T0372-1rxyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rxyA/T0372-1rxyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6608e+007.22e-09 c.56.2.1
2fg9A/T0372-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0372-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9242e+008.43e-05
2bswA/T0372-2bswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bswA/T0372-2bswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6304e+008.41e-14
1pjcA/T0372-1pjcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pjcA/T0372-1pjcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9072e+002.76e-05 1sayA c.2.1.4
c.23.12.2
1xt8A/T0372-1xt8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xt8A/T0372-1xt8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2163e+002.02e-08
1vhsA/T0372-1vhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhsA/T0372-1vhsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4358e+006.34e-10 d.108.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001