Best Alignments for T0371

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zjjA/T0371-1zjjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjjA/T0371-1zjjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6946e-291.11e-143
2c4nA/T0371-2c4nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c4nA/T0371-2c4nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1138e-252.53e-140
1wviA/T0371-1wviA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wviA/T0371-1wviA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4513e-214.67e-148
1vjrA/T0371-1vjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjrA/T0371-1vjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9532e-201.22e-139 c.108.1.14
2gfhA/T0371-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0371-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5059e-191.23e-84
1x42A/T0371-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0371-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5617e-184.53e-82
2ah5A/T0371-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0371-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5394e-171.91e-74
1zrn/T0371-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrn/T0371-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5196e-174.23e-79 1qq5A c.108.1.1
2fdrA/T0371-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0371-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1763e-166.59e-78
1te2A/T0371-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0371-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6571e-163.24e-77 c.108.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001