Best Alignments for T0371

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zjjA/T0371-1zjjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjjA/T0371-1zjjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.1786e-331.11e-143
1wviA/T0371-1wviA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wviA/T0371-1wviA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9135e-304.67e-148
1vjrA/T0371-1vjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjrA/T0371-1vjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3345e-281.22e-139 c.108.1.14
2c4nA/T0371-2c4nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c4nA/T0371-2c4nA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7928e-282.53e-140
2gfhA/T0371-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0371-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1151e-191.89e-75
1x42A/T0371-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0371-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0914e-161.05e-70
1yv9A/T0371-1yv9A-t2k-global-adpstyle1.a2m 1yv9A/T0371-1yv9A-t2k-global-adpstyle1.al 2.4204e-151.67e-73
1ys9A/T0371-1ys9A-t2k-global-adpstyle1.a2m 1ys9A/T0371-1ys9A-t2k-global-adpstyle1.al 4.0664e-151.67e-73
1ydfA/T0371-1ydfA-t2k-global-adpstyle1.a2m 1ydfA/T0371-1ydfA-t2k-global-adpstyle1.al 1.2140e-141.67e-73
1jud/T0371-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0371-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1801e-142.04e-68 1qq5A c.108.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001