Best Alignments for T0371

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1zjjA/T0371-1zjjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjjA/T0371-1zjjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2293e-261.53e-107
2c4nA/T0371-2c4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c4nA/T0371-2c4nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.8995e-242.53e-107
1x42A/T0371-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0371-1x42A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6811e-214.53e-82
2gfhA/T0371-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0371-2gfhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7065e-211.23e-84
1rkqA/T0371-1rkqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rkqA/T0371-1rkqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8822e-215.52e-74 c.108.1.10
1zrn/T0371-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zrn/T0371-1zrn-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5644e-204.23e-79 1qq5A c.108.1.1
2fdrA/T0371-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0371-2fdrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8804e-196.59e-78
2ah5A/T0371-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0371-2ah5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8427e-191.91e-74
1te2A/T0371-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0371-1te2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0998e-193.24e-77 c.108.1.6
1rlmA/T0371-1rlmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rlmA/T0371-1rlmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3511e-181.29e-60

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001