Citations (SAM, SAM-T99, HMMs)
10 20 30 40 50 | | | | | 1 MTTPPARTAKQRIQDTLNRLELDVDAWVSTAGADGG..APYLVPLSYL..WDGETFL..VA.... 2 MTTPPARTAKQRIQDTLNRLELDVDAWVSTAGADGG..APYLVPLSYL..WDGETFL..VA.... 3 ------PRSRARRRRDTERRLAHDVDVWVATASAGG..VPYLVPLSFD..WDGEALL..LS.... 4 ---PAEPRTRARRRRDTEHRLAHDVDVWVASAAPDG..TPYLVPLSFS..WDGAAVW..VA.... 5 --GYVERARELLPWSHVEQRLTHAINYWLCTVRPDG..RPHAVPKWAV..WVDGKLY..FD.... 6 -------PRDVRLADTRHHLESDIDLWVATAHPDGG..APGLVPLSFD..WDGRDLL..LA.... 7 MKDQRRGRKIAMSPAEVDAFLAEERTCRVATTSADG..-PHLTPLWFV..WDGQALW..LN.... 8 MKEQRRGRKIAMSRDEIDAFLTEERTCRVATSSPSG..-PHLTPLWFV..WDGAALW..LN.... 9 MFREMRRKRQLLPQEESVAILEKMTNGTLALHGDNG..YPYAVPLSYV..YADGKIY..FH.... 10 MFREMRRKRQLLPQEESVAILEKMTNGTLALHGDNG..YPYAVPLSYV..YADGKIY..FH.... 11 ------------SPDVARALFATRPVAYLASCSGAG..VPHIVPIVFV..VNGNTIV..TAvd6p 12 ----------AVVPEDREDILTKRSFAHVATIGPHG..EPQSNPVWFE..WDGEYIK..FS.... 13 -----RGRRITMTPGELEAFLTTRRTCRVATVSADG..APHVSTLWFV..WDGASMW..LY.... 14 ------------------DFLTERHLATLTTLRADG..SPHVVPVGFT..WDNEAVVvrVI.... 15 ----------MTDEEWRAFVSDGTRTGKLSTVRADG..SPHIAPIWFL..LDGDDLV..FN.... 16 -------------EPWVERRLREEKILWLTTVRADG..QPQPVPVWFL..WGTEGFL..IY.... 17 ---------KMTEEEWRAFVSHGTRTGKLSTVRADG..RPHVAPIWFL..LDGDDLV..FN.... 18 -ACSYSGPMTLSFDDSVRTLLDGKNFAGVATLGPDG..APQNSVVWIK..REGDTVL..FS.... 19 ------------------AFVAERHLATLTTLRADG..TPHVVAVGFT..WDPEAGIarII.... 20 --------APEVSASVEAFLTQTPHIGVLTTIRPDG..SPHVAPVRFT..WDAEAGLarVM.... 21 ----------MSPEERRGFLLAGTRTAKLSTVRPDG..RPHVAPVWFL..LDGEAVV..FT.... 22 -----------EFGAKVAERLEREQVVWLTTVGPTG..TPQPNPVWFQ..WRDGEFL..LF.... 23 ------------SEDEIWEFVGAAHTGVLTTLRADG..APVSLPTWFV..VVDRTVC..LS.... 24 -----------------------RHTCWLTTINPDG..APHVTGIGAL..FVDGCFW..FE.... 25 -------------------------NFISRIAFNGD..YPYIAPFLYV..FDGEHLY..FL.... 26 --RPGAADVTATEWAEARRRLEAAEIFWVTTVRPGG..GPHVTPVIAA..WHDGVLY..FS.... 27 -----------------------KELVFVATADEEG..TPNVVPIGFArpLDERTIL..IA.... 28 --------------------LLARDLTRLAYVAKDG..TPRTIPIAFA..WHGSTVV..MC.... 29 -------------------LLASTSAAHLAYTAKDG..TPRVIPVGYF..WTGAEFV..IA.... 30 -----------LSDELKTYIDEAKVFATVATNGPGG..QPHLTVVWLA..RDGDDLL..FS.... 31 --------------EERRNFVGAHRTAILGYARRHD..GPALSAVYYV..TDGDEIL..VS.... 32 -----RRSREISDRAEIDAILASDKVLHLALARDN-..VPFLVPVFYG..FDGKALY..VH.... 33 ----------------IDEFLRSHNTCTLATCH-GG..QPRATPLEYI..YDGDSLL..II.... 34 -----------LPDDEVEALLRRANTGTLSLA-DGG..DTYAVPQSFG..YDGETLYfqLA.... 35 --------------QECWQRLGTHGIGRISYVAGPGkeAPVVVPVNFL..VDGRSVV..YR.... 36 -----------LPVEECWQLLTTAPVGRIAWSTTGG..-PVVVPVNFV..VDGRTIK..IR.... 60 70 80 90 | | | | 1 .TPAASPTGRNLSETG..RVRLGIGP...TRD.....L.....VLVEGTALP.....LEPAG... 2 .TPAASPTGRNLSETG..RVRLGIGP...TRD.....L.....VLVEGTALP.....LEPAG... 3 .TPADSPTGRNLAATR..TARLALGH...TRD.....V.....AVIDGDVEV.....LEIDA... 4 .TPAGSPTGRNLAATG..AARLALGP...TRD.....V.....TLIDGGVEV.....FELDA... 5 .GSPATRHARNIATNP..HVVIHLES...GED.....V.....VIVEGIARA.....IDTPApe6 6 .TGRSTPAGRNMRASG..LVRLSLGE...LRD.....V.....IMVDATVVE.....VPLSS... 7 .SVVKSQRWTDLERDP..RVAIVVDT...GHE.....FtelrgVEIRGRAESvg8vgTPDPG... 8 .SVVKSQRWTDIARDP..RVAVLIDG...GHA.....FnelhgVELRGKLESvg8tgTPDPD... 9 .CAKIGHKVDAIMQNN..KVSFCVVE...QDN.....Ik11rsVIVFGKAYI.....LTDET... 10 .CAKIGHKVDAIMQNN..KVSFCVVE...QDN.....Ik11rsVIVFGKAYI.....LTDET... 11 kSGRVLRRIRNIRENP..SVAVLADR...YTDdw6lwW.....IRADGRARL.....MDGAD... 12 .QTTTRQKYRNLKRDS..RIALSVHD...PDEphr..Y.....IEIRGRAEK.....IEPDP... 13 .SVVRSRRWADLRRDP..RVAIVVDT...GEE.....YdelrgVELSGRVAF.....VGEAPrt8 14 .TNDVSQKAINAGRSG..TAAVCQVE...GRR.....W.....LSLEGRSRV.....LDDAD... 15 .TGKDTVKGRNLLRDG..RIALCVDD...DRPpfh..F.....VVLQGRARI.....SEDLG... 16 .SRPNAQKLRNIRSNP..RVGLNLNC...DERggs..V.....VRAEGTAEI.....VEDAA... 17 .TARDSVKGRNLARDG..RAALCVDE...DRPpfa..F.....VVFQGQAEL.....SEDLD... 18 .STAGRQKVRNLRRDP..RISLSVFD...LANp....-yts..VEIRGTAEI.....LPDEN... 19 .TNDGSVKVRNVRRSG..YAAVSQVD...GAR.....W.....LTLEGPATV.....LDDPD... 20 .TVSSSRKARNLIAAPgsRVAICQVA...GFA.....W.....VTLEGSAVV.....ADDPV... 21 .THESTVKARNMRRNP..RVSLCVDD...ERPpys..F.....VLVEGTARL.....SAGDP... 22 .SQPDTPKIRNIRRNP..RVSVHFNStvhGGD.....V.....VVFTGTARI.....AEDRP... 23 .TPTGARKLGRVRRDP..RAAFLVES...GQA.....WaelraVHLSGRVGT.....VEDAT... 24 .TGERTRKARNLARDP..RCALSVAT...AEF.....D.....VVLEGRASR.....VTDPV... 25 .STRYGRKIELLKRNP..YVAVEIEH...YSDdl6yrF.....VTLQGQIVE.....ENDPS... 26 .TGPGEQKARNLAHDA..HCALITGG...NSLte...-gfd..LVVEGEAEP.....VGDRA... 27 .DNYMKKTIRNLHENP..RIALIPQN...ARE.....Cp....YQFKGTVEI.....FKSGK... 28 .TTKNAPKIHALRANP..MVALTIDT...EVHppk..I.....LLIRGRAEL.....DFTDG... 29 .TAATSPKVAALSACA..DVALSIDG...GDTpet..-ara..LSIRGRARV.....QIVDG... 30 .TTVDRQQGKNLAADP..RVTVLINP...PEKpyv..Y.....AEIRGTATL.....TPDPDrt. 31 .TPGARAKTRAIARNP..KVSLCVLD...EKYpps..Y.....VTLFCDAVV.....DEDFD... 32 .SASAGTKIEILKTNN..RVCFEVTT...ENG.....Vv15rtVIGFGRASF.....VDDVA... 33 .S-EGGEKFAGLPENE..RVSVAVYE...DYTsm...-sdlagMQITGAASI.....LHGKD... 34 .YDDDSRKMEYIETTD..TATFTVYE...ERPa....-qs...VIVQGPFEP.....VPEG-... 35 .TDPAGV--AGIRAGE..PVAFEADH...VDEmtgl.-gws..VLLAGTAEH.....----P... 36 .TAAYSAMVQK-ADVE..RVAFQVDR...IDEathtg-ws...VLARGRAEV.....RYGE-... 100 110 120 130 140 15 | | | | | 1 ..LPDGVGDTFAEKT.....GF...DPRRLT.TSYLY.FRISPRRVQAWREANELSGRELMRDGE 2 ..LPDGVGDTFAEKT.....GF...DPRRLT.TSYLY.FRISPRRVQAWREANELSGRELMRDGE 3 ..LPRERGDRFAART.....GF...DPRALS.TPYRW.FCIFPRRIQAWREENELAGRELMRDGR 4 ..LPQEHGDRFAARA.....GF...DPRGAA.GPYRW.FRITPRRILAWREVNELKGRELMRDGR 5 tlVAQAYTTKYATMG.....YA...PDPHQW.DNGGL.FAITPHTVIAWTAFTEDPTKF------ 6 ..VPSARWEAYAART.....GW...DPREAG.PDHAA.YVVTPVTIQAWREYPELVDRMLMREGR 7 ..LATPELLYARKYA.....GR...DEMHYD.GRHAW.LRVTPEKITSW---------------- 8 ..LETPEKLFAQKYT.....GR...DEMHYD.GRHAW.LRLTPEKITSW---------------- 9 ..EKRMALTLLMNKY.....SF...GEPGLS.DEI--.--------------------------- 10 ..EKRMALTLLVNKY.....SF...GEPGLS.DEI--.--------------------------- 11 ..PSAQRAWGALTAR.....YP...QYAEHP.PAGMV.IAIDVHRWSGWAASDAAIARATSAEPT 12 ..NRSFINKMSKKYL.....GQ...ETYPPE.SPGEE.RVVVY---------------------- 13 aeLDFPETLFARKNF.....GL...QEMPHD.GRHAW.LRLTPEEVVSWD--------------- 14 ..SVLDAETRYAARY.....RP...PRINPT.RVVIE.IAV------------------------ 15 ..ELRHWAGRIGARY.....MG...EE----.-----.--------------------------- 16 ..PASEIPEYVQKYRed6rlGY...EPAGFAlDYAVA.VRVTPRRWQSW---------------- 17 ..EVRLWATRLGARY.....MG...EE----.-----.--------------------------- 18 ..KRLPYELSHKYLG.....ID...PPAEKD.DEVRViIRVVPQKIV------------------ 19 ..SVADAEHRYAGRY.....RV...PRENPT.RVVIA.IRV------------------------ 20 ..RVTEGARRYTRRY.....RS...GPPNPP.GRVV-.--------------------------- 21 ..ELLDWTTRIGGRY.....MG...QE----.-----.--------------------------- 22 ..TEQEIAAFTAKY-.....--...------.-----.--------------------------- 23 ..TRDRVRSLLDEKY.....--...------.---AA.FRVSPQR-------------------- 24 ..TVVAMAERWAAEG.....WP...ARVDES.G----.--------------------------- 25 ..TKRRVKEMFADLI.....--...------.-----.--------------------------- 26 ..VLEEVIAAYEAKY.....GA...HITSAD.GTF--.--------------------------- 27 ..YFDMVVEWAQNVM.....--...------.-----.--------------------------- 28 ..IPDEYLEAN----.....--...------.-----.--------------------------- 29 ..VVPEYLAAARKSM.....--...------.-----.--------------------------- 30 ..LPDQLSLKYTGQR.....YAefnPASAQD.GDRIV.VRVTPRK-------------------- 31 ..LAVDVAFRVAQRI.....IG...------.-----.--------------------------- 32 ..EKTRALDLIVSRF.....T-...------.-----.--------------------------- 33 ..AEHVYKLRGLNPD.....AV...KDLNID.-----.--------------------------- 34 ..-------------.....--...------.-----.--------------------------- 35 ..VEREALEALARRR.....GA...VPWAGG.RRDLW.VRVLPHQV------------------- 36 ..-------------.....--...------.-----.--------------------------- 0 | 1 WLVTD 2 WLVTD 3 WL--- 4 WL--- 5 ----- 6 WL--- 7 ----- 8 ----- 9 ----- 10 ----- 11 WPEDG 12 ----- 13 ----- 14 ----- 15 ----- 16 ----- 17 ----- 18 ----- 19 ----- 20 ----- 21 ----- 22 ----- 23 ----- 24 ----- 25 ----- 26 ----- 27 ----- 28 ----- 29 ----- 30 ----- 31 ----- 32 ----- 33 ----- 34 ----- 35 ----- 36 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