Best Alignments for T0368

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1na3A/T0368-1na3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1na3A/T0368-1na3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1151e-111.89e-46 k.38.1.1
1elwA/T0368-1elwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1elwA/T0368-1elwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3638e-111.15e-55 1a17 a.118.8.1
1fchA/T0368-1fchA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fchA/T0368-1fchA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2843e-111.55e-44 1fchA a.118.8.1
1xnfA/T0368-1xnfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xnfA/T0368-1xnfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3076e-111.24e-47
2fo7A/T0368-2fo7A-t2k-global-adpstyle1.a2m 2fo7A/T0368-2fo7A-t2k-global-adpstyle1.al 2.0151e-101.43e-33
2fbnA/T0368-2fbnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbnA/T0368-2fbnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0628e-103.71e-47
1wm5A/T0368-1wm5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wm5A/T0368-1wm5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0959e-103.21e-47
2avpA/T0368-2avpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2avpA/T0368-2avpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5726e-103.02e-36
1e96B/T0368-1e96B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e96B/T0368-1e96B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2034e-092.33e-48 1e96B a.118.8.1
1ihgA/T0368-1ihgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihgA/T0368-1ihgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9281e-091.14e-46 2cpl a.118.8.1
b.62.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001