Best Alignments for T0368

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1na3A/T0368-1na3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1na3A/T0368-1na3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7523e-032.14e-12 k.38.1.1
1elwA/T0368-1elwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1elwA/T0368-1elwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6319e-034.79e-16 1a17 a.118.8.1
2fbnA/T0368-2fbnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbnA/T0368-2fbnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2320e-027.80e-19
1ihgA/T0368-1ihgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihgA/T0368-1ihgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2001e-021.76e-11 2cpl a.118.8.1
b.62.1.1
1hz4A/T0368-1hz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hz4A/T0368-1hz4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1787e-012.12e-17 a.118.8.2
1xnfA/T0368-1xnfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xnfA/T0368-1xnfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7284e+001.99e-11
2ff4A/T0368-2ff4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ff4A/T0368-2ff4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1986e+001.18e-10
1oshA/T0368-1oshA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oshA/T0368-1oshA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0239e+008.13e-04 a.123.1.1
1hh8A/T0368-1hh8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hh8A/T0368-1hh8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1769e+001.17e-14 1e96B a.118.8.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001