Best Alignments for T0368

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fbnA/T0368-2fbnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fbnA/T0368-2fbnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9720e-044.40e-21
1elwA/T0368-1elwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1elwA/T0368-1elwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0536e-035.88e-17 1a17 a.118.8.1
1na3A/T0368-1na3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1na3A/T0368-1na3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1008e-032.09e-13 k.38.1.1
2avpA/T0368-2avpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2avpA/T0368-2avpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8829e-031.16e-11
1ihgA/T0368-1ihgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ihgA/T0368-1ihgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2855e-038.73e-12 2cpl a.118.8.1
b.62.1.1
1hh8A/T0368-1hh8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hh8A/T0368-1hh8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0280e-024.09e-14 1e96B a.118.8.1
1hz4A/T0368-1hz4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hz4A/T0368-1hz4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0977e-013.29e-16 a.118.8.2
1xnfA/T0368-1xnfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xnfA/T0368-1xnfA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3332e-015.12e-12
1wm5A/T0368-1wm5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wm5A/T0368-1wm5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5436e-012.15e-12
1qqeA/T0368-1qqeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qqeA/T0368-1qqeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5364e-011.60e-09 1qqeA a.118.8.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001