Best Alignments for T0366

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fneA/T0366-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fneA/T0366-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4368e-154.24e-63
2fe5A/T0366-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe5A/T0366-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0631e-141.29e-58
1tp5A/T0366-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp5A/T0366-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2256e-141.34e-59
1g9oA/T0366-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g9oA/T0366-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1012e-147.01e-61 1pdr b.36.1.1
2fcfA/T0366-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fcfA/T0366-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2928e-148.19e-59
1qavA/T0366-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qavA/T0366-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6464e-146.47e-60 1qauA b.36.1.1
2h2bA/T0366-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h2bA/T0366-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4818e-131.49e-57
2h3lA/T0366-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3lA/T0366-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0843e-124.36e-54
1wf7A/T0366-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wf7A/T0366-1wf7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7948e-121.39e-48
2f0aA/T0366-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f0aA/T0366-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4896e-124.85e-48

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001