Best Alignments for T0366

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fneA/T0366-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fneA/T0366-2fneA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1663e-164.24e-63
2fe5A/T0366-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fe5A/T0366-2fe5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1454e-151.29e-58
2fcfA/T0366-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fcfA/T0366-2fcfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4371e-158.19e-59
1tp5A/T0366-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp5A/T0366-1tp5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6333e-151.34e-59
1g9oA/T0366-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g9oA/T0366-1g9oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1096e-157.01e-61 1pdr b.36.1.1
1qavA/T0366-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qavA/T0366-1qavA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6613e-156.47e-60 1qauA b.36.1.1
2h2bA/T0366-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h2bA/T0366-2h2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7108e-141.49e-57
2f0aA/T0366-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f0aA/T0366-2f0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9017e-134.85e-48
2h3lA/T0366-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h3lA/T0366-2h3lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8923e-134.36e-54
1wf7A/T0366-1wf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wf7A/T0366-1wf7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2972e-121.09e-45

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001