Best Alignments for T0365

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1sumB/T0365-1sumB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sumB/T0365-1sumB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5996e-041.01e-15 a.7.12.1
1xwmA/T0365-1xwmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwmA/T0365-1xwmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1024e-032.09e-15
1n81A/T0365-1n81A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n81A/T0365-1n81A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8842e-011.80e-15 a.185.1.1
1vctA/T0365-1vctA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vctA/T0365-1vctA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5799e+001.75e-04
1o5hA/T0365-1o5hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5hA/T0365-1o5hA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7204e+009.61e-10 a.191.1.1
1eumA/T0365-1eumA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1eumA/T0365-1eumA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9911e+001.84e-06 1eumA a.25.1.1
1t72A/T0365-1t72A-t2k-global-adpstyle1.a2m 1t72A/T0365-1t72A-t2k-global-adpstyle1.al 3.1356e+008.62e-09
1vljA/T0365-1vljA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vljA/T0365-1vljA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6747e+007.29e-05 e.22.1.2
1ofcX/T0365-1ofcX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ofcX/T0365-1ofcX-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6852e+009.04e-09 a.4.1.3
a.4.1.13
a.187.1.1
1j1vA/T0365-1j1vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j1vA/T0365-1j1vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8701e+003.02e-08 a.4.12.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001