Best Alignments for T0365

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1sumB/T0365-1sumB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sumB/T0365-1sumB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8085e-062.20e-19 a.7.12.1
1xwmA/T0365-1xwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xwmA/T0365-1xwmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4317e-041.59e-19
1t72A/T0365-1t72A-t04-global-adpstyle1.a2m 1t72A/T0365-1t72A-t04-global-adpstyle1.al 2.1787e-024.03e-15
1vctA/T0365-1vctA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vctA/T0365-1vctA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2261e-011.54e-06
1o5hA/T0365-1o5hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o5hA/T0365-1o5hA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6967e-011.08e-14 a.191.1.1
1n81A/T0365-1n81A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1n81A/T0365-1n81A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9150e-014.64e-13 a.185.1.1
1j1vA/T0365-1j1vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1j1vA/T0365-1j1vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1613e+009.34e-09 a.4.12.2
1hw1A/T0365-1hw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hw1A/T0365-1hw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1795e+002.13e-06 1e2xA a.4.5.6
a.78.1.1
1ouvA/T0365-1ouvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ouvA/T0365-1ouvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2410e+005.50e-08 a.118.18.1
1jk0A/T0365-1jk0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jk0A/T0365-1jk0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6717e+001.51e-14 a.25.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001