Best Alignments for T0362

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1z54A/T0362-1z54A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z54A/T0362-1z54A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0629e-181.35e-65
1s5uA/T0362-1s5uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5uA/T0362-1s5uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2885e-181.19e-71 d.38.1.1
2cyeA/T0362-2cyeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0362-2cyeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7768e-161.70e-59
2gf6A/T0362-2gf6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf6A/T0362-2gf6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5983e-162.81e-61
2av9A/T0362-2av9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2av9A/T0362-2av9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2550e-146.35e-51
2aliA/T0362-2aliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aliA/T0362-2aliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1441e-133.47e-48
1yliA/T0362-1yliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0362-1yliA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1368e-093.61e-35
1vpmA/T0362-1vpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0362-1vpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5653e-085.48e-37
2essA/T0362-2essA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2essA/T0362-2essA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2007e-062.97e-42
2h4uA/T0362-2h4uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h4uA/T0362-2h4uA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0706e-068.69e-29

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001