Best Alignments for T0362

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cyeA/T0362-2cyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0362-2cyeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1296e-164.30e-77
1s5uA/T0362-1s5uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1s5uA/T0362-1s5uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5561e-151.18e-79 d.38.1.1
1z54A/T0362-1z54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z54A/T0362-1z54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4134e-151.48e-75
2aliA/T0362-2aliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aliA/T0362-2aliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6387e-134.23e-63
2gf6A/T0362-2gf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gf6A/T0362-2gf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4177e-138.55e-68
1yliA/T0362-1yliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0362-1yliA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3037e-125.84e-56
1vpmA/T0362-1vpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0362-1vpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7476e-121.82e-56
2essA/T0362-2essA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2essA/T0362-2essA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5829e-112.11e-63
2gvhA/T0362-2gvhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gvhA/T0362-2gvhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5235e-105.20e-43
2h4uA/T0362-2h4uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2h4uA/T0362-2h4uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4477e-083.12e-44

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001