Best Alignments for T0358

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f4qA/T0358-2f4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f4qA/T0358-2f4qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8661e-018.35e-07
1yaxA/T0358-1yaxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yaxA/T0358-1yaxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0071e+001.57e-06
2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c3vA/T0358-2c3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2813e+009.00e-02
1ffyA/T0358-1ffyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ffyA/T0358-1ffyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3106e+003.94e+01 1qu2A a.27.1.1
b.51.1.1
c.26.1.1
2a2pA/T0358-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a2pA/T0358-2a2pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3758e+008.82e-10
1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1lktA/T0358-1lktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4310e+004.05e-04 1lktA b.90.1.1
1vq2A/T0358-1vq2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vq2A/T0358-1vq2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7565e+001.37e-08
1tp6A/T0358-1tp6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tp6A/T0358-1tp6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0066e+001.33e+01 d.17.4.12
1qx4A/T0358-1qx4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qx4A/T0358-1qx4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2819e+001.72e+01 b.43.4.2
c.25.1.1
1yx1A/T0358-1yx1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yx1A/T0358-1yx1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8273e+001.06e-02

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001