Best Alignments for T0357

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v7lA/T0357-1v7lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v7lA/T0357-1v7lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4746e-029.86e-14
1q1gA/T0357-1q1gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q1gA/T0357-1q1gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6517e+002.17e-10 c.56.2.1
2d13A/T0357-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0357-2d13A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8225e+005.04e-08
2bsxA/T0357-2bsxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bsxA/T0357-2bsxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5971e+002.02e-07
1i9aA/T0357-1i9aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i9aA/T0357-1i9aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9200e+004.68e+03 1i9aA d.113.1.2
1nbwA/T0357-1nbwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nbwA/T0357-1nbwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7824e+002.33e+00 c.8.6.1
c.55.1.6
c.55.1.6
2ganA/T0357-2ganA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ganA/T0357-2ganA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4131e+002.61e-06
1hf2A/T0357-1hf2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hf2A/T0357-1hf2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.5888e+001.56e-03 1hf2A b.80.3.1
c.102.1.1
1vbkA/T0357-1vbkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vbkA/T0357-1vbkA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0059e+019.25e-03
1p3rA/T0357-1p3rA-t04-local-adpstyle1.a2m 1p3rA/T0357-1p3rA-t04-local-adpstyle1.al 1.0151e+015.78e+00 b.55.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001