Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5583e+001.01e-04
2gj8A/T0356-2gj8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gj8A/T0356-2gj8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0603e+001.71e-08
1i35A/T0356-1i35A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1i35A/T0356-1i35A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2300e+014.30e+02 d.15.1.5
1vp4A/T0356-1vp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vp4A/T0356-1vp4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2805e+011.03e-02
2lbd/T0356-2lbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2lbd/T0356-2lbd-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3600e+011.16e-01 2lbd a.123.1.1
1e9rA/T0356-1e9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4078e+019.56e-04 c.37.1.11
1bqk/T0356-1bqk-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bqk/T0356-1bqk-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5532e+011.40e-03 1bqk b.6.1.1
2al2A/T0356-2al2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2al2A/T0356-2al2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8013e+016.34e-05
1ri7A/T0356-1ri7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ri7A/T0356-1ri7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8684e+011.19e-02 a.4.5.32
d.58.4.2
1oneA/T0356-1oneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1oneA/T0356-1oneA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8949e+011.02e-04 4enl c.1.11.1
d.54.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001