# List of top-scoring protein chains for t04-100-30-CB_burial_14_7-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
# FSSP representative for each protein chain taken from FSSP:
# ------------------Citations (FSSP) -----------------------------------
# L. Holm and C. Sander (1996) Mapping the protein universe. Science 273:595-602.
# 
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	FSSP-rep	SCOP_domain	SCOP_suid
5S	5N	12S	6S	12S	10N
1wqaA	455	3.50e+00			
1jnrA	643	3.96e+00		a.7.3.1,c.3.1.4,d.168.1.1	66966,66967,66968
2fjbA	643	4.50e+00			
1wdtA	665	6.12e+00			
1a6q	382	7.25e+00	1a6q	a.159.1.1,d.219.1.1	75801,75802
1w44A	331	9.67e+00			
2f94F	350	1.40e+01			
1wnlA	235	1.74e+01			
1yv5A	374	1.75e+01			
1vkhA	273	1.82e+01		c.69.1.32	108662
1wqwA	235	1.94e+01			
1k2fA	190	2.03e+01		b.8.1.2	68054
1yq7A	374	2.07e+01			
1uby	367	2.27e+01	1uby	a.128.1.1	19435
1d8wA	426	2.54e+01	1de5A	c.1.15.2	29394
1ju2A	536	2.97e+01		c.3.1.2,d.16.1.1	77169,77170
1xi3A	215	3.34e+01		c.1.3.1	109601
1nvmB	312	3.37e+01		c.2.1.3,d.81.1.1	86251,86252
1q77A	138	3.69e+01		c.26.2.4	96023
2a7mA	250	4.64e+01			
1bqk	124	5.41e+01	1bqk	b.6.1.1	22889
1n67A	359	6.01e+01		b.2.3.4,b.2.3.4	85354,85355
2b99A	156	6.02e+01			
1aocA	175	6.04e+01	1aocA	g.17.1.5	44817
1ymqA	261	6.07e+01			
1zjcA	418	6.59e+01			
2bitX	165	6.96e+01			
1ctn	540	7.12e+01	1ctn	b.1.18.2,c.1.8.5,d.26.3.1	21876,29005,38439
1nd4A	264	7.23e+01		d.144.1.6	91815
1kt6A	183	7.34e+01		b.60.1.1	84466
1ws6A	171	7.47e+01			
1pb7A	292	7.51e+01		c.94.1.1	88025
1s0uA	408	7.59e+01		b.43.3.1,b.44.1.1,c.37.1.8	98302,98303,98304
1gw0A	559	7.61e+01		b.6.1.3,b.6.1.3,b.6.1.3	70623,70624,70625
2fv1A	377	7.87e+01			
1iq8A	582	7.88e+01		c.1.20.1,b.122.1.1,d.17.6.1	71270,83074,83075
1xmaA	145	7.94e+01			
1ztdA	133	7.97e+01			
1y1pA	342	8.08e+01			
1edqA	540	8.41e+01	1ctn	b.1.18.2,c.1.8.5,d.26.3.1	21873,29002,38436
1kbvA	327	8.48e+01		b.6.1.3,b.6.1.3	68395,68396
1yrlA	491	8.49e+01			
1v0wA	506	8.69e+01		d.136.1.2,d.136.1.2	108220,108221
2eueA	279	8.73e+01			
1f0iA	504	8.74e+01	1f0iA	d.136.1.2,d.136.1.2	59566,59567
1epxA	370	8.80e+01	1fbaA	c.1.10.1	29150
1l1lA	739	8.90e+01		c.7.1.4	73470