Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1ejeA/T0356-1ejeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejeA/T0356-1ejeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5014e-011.71e-17 1ejeA b.45.1.2
1m2xA/T0356-1m2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m2xA/T0356-1m2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4072e+008.70e-10 d.157.1.1
1ejbA/T0356-1ejbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejbA/T0356-1ejbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0362e+012.77e-04 1rvv1 c.16.1.1
1o2dA/T0356-1o2dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o2dA/T0356-1o2dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0765e+011.64e-09 e.22.1.2
1kzhA/T0356-1kzhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kzhA/T0356-1kzhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3391e+013.77e-05 c.89.1.1
1w78A/T0356-1w78A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w78A/T0356-1w78A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5971e+012.63e-05
1hfeL/T0356-1hfeL-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1hfeL/T0356-1hfeL-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6879e+012.24e-07 1fehA c.96.1.1
d.58.1.5
2tbd/T0356-2tbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2tbd/T0356-2tbd-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1835e+012.96e-04 2tbd d.89.1.1
1qh3A/T0356-1qh3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qh3A/T0356-1qh3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2101e+013.89e-09 1qh5A d.157.1.2
2an1A/T0356-2an1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2an1A/T0356-2an1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2490e+014.86e-04

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001