Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7237e+008.66e-04
1w1wA/T0356-1w1wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1wA/T0356-1w1wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6541e+001.72e-08
2u1a/T0356-2u1a-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2u1a/T0356-2u1a-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2999e+009.27e-05 2u1a d.58.7.1
1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.1497e+001.20e-04 c.37.1.11
1q7zA/T0356-1q7zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7zA/T0356-1q7zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2583e+003.69e-17 c.1.21.2
c.1.26.1
1ejeA/T0356-1ejeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ejeA/T0356-1ejeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.0942e+004.79e-18 1ejeA b.45.1.2
1vjeA/T0356-1vjeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjeA/T0356-1vjeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9890e+003.77e-12 d.185.1.2
1aisB/T0356-1aisB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aisB/T0356-1aisB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0389e+011.04e-10 1aisB a.74.1.2
a.74.1.2
1o2dA/T0356-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o2dA/T0356-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0668e+018.60e-14 e.22.1.2
1sviA/T0356-1sviA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sviA/T0356-1sviA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0990e+016.27e-15 c.37.1.8

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001