Best Alignments for T0356

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wqaA/T0356-1wqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6101e+008.66e-04
1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1e9rA/T0356-1e9rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0205e+001.20e-04 c.37.1.11
1pvvA/T0356-1pvvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pvvA/T0356-1pvvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5648e+001.02e-11 c.78.1.1
c.78.1.1
1aisB/T0356-1aisB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aisB/T0356-1aisB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3124e+001.04e-10 1aisB a.74.1.2
a.74.1.2
1o2dA/T0356-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o2dA/T0356-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3250e+008.60e-14 e.22.1.2
1vheA/T0356-1vheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vheA/T0356-1vheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9747e+001.98e-10 b.49.3.1
c.56.5.4
1vjeA/T0356-1vjeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjeA/T0356-1vjeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9946e+002.07e-11 d.185.1.2
1q7zA/T0356-1q7zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q7zA/T0356-1q7zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4156e+001.65e-13 c.1.21.2
c.1.26.1
2f5gA/T0356-2f5gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f5gA/T0356-2f5gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.5816e+001.44e-09
1w1wA/T0356-1w1wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1wA/T0356-1w1wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7500e+001.72e-08

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001