Best Alignments for T0352

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jpaA/T0352-1jpaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jpaA/T0352-1jpaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.3965e-011.92e-04 d.144.1.7
1sz2A/T0352-1sz2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sz2A/T0352-1sz2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7582e+005.95e-04
1jhgA/T0352-1jhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jhgA/T0352-1jhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1257e+001.84e+00 1jhgA a.4.12.1
1zd3A/T0352-1zd3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zd3A/T0352-1zd3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.9710e+002.96e-06
1zv1A/T0352-1zv1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zv1A/T0352-1zv1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0247e+018.03e-06
2aheA/T0352-2aheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aheA/T0352-2aheA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2872e+011.37e-04
2fiyA/T0352-2fiyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fiyA/T0352-2fiyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3002e+011.06e+01
1m6jA/T0352-1m6jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1m6jA/T0352-1m6jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3160e+012.98e-02 c.1.1.1
1zboA/T0352-1zboA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zboA/T0352-1zboA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5918e+015.63e-06
1w1oA/T0352-1w1oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w1oA/T0352-1w1oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6715e+014.83e-02 d.58.32.4
d.145.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001