Best Alignments for T0352

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jpaA/T0352-1jpaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jpaA/T0352-1jpaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4813e+001.11e-03 d.144.1.7
1sz2A/T0352-1sz2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sz2A/T0352-1sz2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.4863e+001.65e-04
1myo/T0352-1myo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1myo/T0352-1myo-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1100e+011.45e-01 2myo d.211.1.1
1zd3A/T0352-1zd3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zd3A/T0352-1zd3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2458e+013.89e-06
1jhgA/T0352-1jhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jhgA/T0352-1jhgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5624e+011.37e+00 1jhgA a.4.12.1
2fiyA/T0352-2fiyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fiyA/T0352-2fiyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7125e+011.41e+01
2c4jA/T0352-2c4jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c4jA/T0352-2c4jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8299e+011.28e-04
1eptA/T0352-1eptA-t06-local-adpstyle1.a2m 1eptA/T0352-1eptA-t06-local-adpstyle1.al 2.0167e+013.26e+01 5ptp b.47.1.2
1tzvA/T0352-1tzvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1tzvA/T0352-1tzvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1089e+012.59e-03 a.79.1.1
1b4pA/T0352-1b4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1b4pA/T0352-1b4pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3126e+011.16e-04 a.45.1.1
c.47.1.5

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001