Best Alignments for T0351

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1swvA/T0351-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0351-1swvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.7983e-012.14e-03
1exrA/T0351-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1exrA/T0351-1exrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1907e+004.38e-06 1cll a.39.1.5
2ahqA/T0351-2ahqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ahqA/T0351-2ahqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9369e+004.39e-06
1xqaA/T0351-1xqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xqaA/T0351-1xqaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1990e+006.13e-02
1yirA/T0351-1yirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yirA/T0351-1yirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6628e+006.53e-08
2a3qA/T0351-2a3qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2a3qA/T0351-2a3qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0978e+006.41e-03
2f3yA/T0351-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f3yA/T0351-2f3yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5625e+002.01e-06
1fseA/T0351-1fseA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fseA/T0351-1fseA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7425e+004.52e-07 1fseA a.4.6.2
2fi9A/T0351-2fi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi9A/T0351-2fi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.8135e+003.57e-07
1jl5A/T0351-1jl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jl5A/T0351-1jl5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4005e+001.92e-05 c.10.2.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001