PFRMAT RR
TARGET T0351
AUTHOR SAM-T07
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa7str2_7near3nsep5.47.data03.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
MILYDAIMYKYPNAVSRKDFELRNDGNGSYIEKWNLRAPLPTQAELETWW
EELQKNPPYEPPDQVELLAQELSQEKLARKQLEELNKTLGNELSDIKLSL
LSLKGDYAELEHHHHHH
4 13 0 8 0.518915
4 14 0 8 0.660553
4 15 0 8 0.541169
4 16 0 8 0.595408
4 17 0 8 0.601028
4 18 0 8 0.577968
4 19 0 8 0.613274
4 20 0 8 0.781598
4 21 0 8 0.485082
4 22 0 8 0.752298
4 23 0 8 0.500497
4 24 0 8 0.487546
4 25 0 8 0.446036
4 26 0 8 0.437278
4 27 0 8 0.397155
4 28 0 8 0.581432
4 29 0 8 0.402257
4 30 0 8 0.657542
4 31 0 8 0.757515
4 32 0 8 0.61803
4 33 0 8 0.560128
4 34 0 8 0.738949
4 35 0 8 0.532033
4 36 0 8 0.628188
4 37 0 8 0.418993
4 38 0 8 0.53138
4 39 0 8 0.402346
4 41 0 8 0.46087
4 42 0 8 0.425832
4 46 0 8 0.620064
4 49 0 8 0.621262
4 50 0 8 0.545498
4 53 0 8 0.518492
4 54 0 8 0.4422
4 64 0 8 0.500168
4 67 0 8 0.519134
4 68 0 8 0.466702
4 72 0 8 0.489865
4 78 0 8 0.498827
4 81 0 8 0.432641
4 82 0 8 0.455502
4 85 0 8 0.503967
4 86 0 8 0.42811
4 89 0 8 0.428608
4 92 0 8 0.433811
4 96 0 8 0.446334
4 98 0 8 0.433349
4 103 0 8 0.402769
5 14 0 8 0.512058
5 15 0 8 0.432628
5 16 0 8 0.477634
5 17 0 8 0.492103
5 18 0 8 0.469927
5 19 0 8 0.504942
5 20 0 8 0.610833
5 22 0 8 0.575697
5 23 0 8 0.421313
5 24 0 8 0.40974
5 28 0 8 0.457143
5 30 0 8 0.519645
5 31 0 8 0.575462
5 32 0 8 0.526388
5 33 0 8 0.463406
5 34 0 8 0.598631
5 35 0 8 0.462331
5 36 0 8 0.487639
5 38 0 8 0.443628
5 49 0 8 0.432753
6 16 0 8 0.438305
6 17 0 8 0.458184
6 18 0 8 0.400841
6 19 0 8 0.461088
6 20 0 8 0.77402
6 22 0 8 0.760168
6 28 0 8 0.481946
6 30 0 8 0.569823
6 31 0 8 0.809512
6 32 0 8 0.527407
6 33 0 8 0.429358
6 34 0 8 0.738659
6 35 0 8 0.415198
6 36 0 8 0.622531
6 38 0 8 0.402228
6 46 0 8 0.546209
6 49 0 8 0.601992
6 50 0 8 0.566011
6 53 0 8 0.495344
6 64 0 8 0.458871
6 67 0 8 0.451977
6 68 0 8 0.436975
6 72 0 8 0.440495
6 78 0 8 0.496606
6 81 0 8 0.407376
6 82 0 8 0.579725
6 85 0 8 0.512752
6 86 0 8 0.45309
6 89 0 8 0.434192
6 92 0 8 0.398014
6 93 0 8 0.452466
6 96 0 8 0.466214
6 98 0 8 0.440313
7 16 0 8 0.597818
7 17 0 8 0.605262
7 18 0 8 0.540026
7 19 0 8 0.598201
7 20 0 8 0.884241
7 21 0 8 0.434306
7 22 0 8 0.859222
7 23 0 8 0.453239
7 24 0 8 0.411264
7 28 0 8 0.625125
7 30 0 8 0.712371
7 31 0 8 0.895735
7 32 0 8 0.630997
7 33 0 8 0.527889
7 34 0 8 0.829505
7 35 0 8 0.497495
7 36 0 8 0.735235
7 38 0 8 0.493969
7 41 0 8 0.405873
7 46 0 8 0.646398
7 49 0 8 0.658713
7 50 0 8 0.656744
7 53 0 8 0.574809
7 54 0 8 0.451563
7 64 0 8 0.538203
7 67 0 8 0.523814
7 68 0 8 0.528549
7 72 0 8 0.531631
7 78 0 8 0.535909
7 81 0 8 0.413509
7 82 0 8 0.625296
7 85 0 8 0.526486
7 86 0 8 0.512222
7 89 0 8 0.480292
7 92 0 8 0.461382
7 93 0 8 0.518045
7 96 0 8 0.54107
7 98 0 8 0.520276
7 100 0 8 0.396723
7 103 0 8 0.451714
8 17 0 8 0.575727
8 18 0 8 0.530791
8 19 0 8 0.561011
8 20 0 8 0.769233
8 21 0 8 0.416777
8 22 0 8 0.747297
8 23 0 8 0.453162
8 24 0 8 0.429701
8 28 0 8 0.543878
8 30 0 8 0.611774
8 31 0 8 0.725207
8 32 0 8 0.585052
8 33 0 8 0.498927
8 34 0 8 0.734544
8 35 0 8 0.487256
8 36 0 8 0.607377
8 38 0 8 0.488188
8 41 0 8 0.408798
8 46 0 8 0.516061
8 49 0 8 0.548855
8 50 0 8 0.47451
8 53 0 8 0.465512
8 54 0 8 0.405436
8 64 0 8 0.435076
8 67 0 8 0.455968
8 68 0 8 0.403931
8 72 0 8 0.428529
8 78 0 8 0.422722
8 85 0 8 0.438636
8 96 0 8 0.400428
8 98 0 8 0.395182
9 18 0 8 0.568961
9 19 0 8 0.616199
9 20 0 8 0.835168
9 21 0 8 0.472345
9 22 0 8 0.824859
9 23 0 8 0.499492
9 24 0 8 0.443795
9 25 0 8 0.393595
9 28 0 8 0.58861
9 30 0 8 0.673285
9 31 0 8 0.819125
9 32 0 8 0.644436
9 33 0 8 0.551153
9 34 0 8 0.802362
9 35 0 8 0.526552
9 36 0 8 0.682002
9 38 0 8 0.516984
9 41 0 8 0.44455
9 42 0 8 0.389996
9 46 0 8 0.587238
9 49 0 8 0.595321
9 50 0 8 0.535495
9 53 0 8 0.516114
9 54 0 8 0.437602
9 64 0 8 0.513786
9 67 0 8 0.504647
9 68 0 8 0.459657
9 72 0 8 0.48185
9 78 0 8 0.469629
9 81 0 8 0.391459
9 82 0 8 0.45893
9 85 0 8 0.478447
9 86 0 8 0.417933
9 89 0 8 0.411337
9 92 0 8 0.424536
9 93 0 8 0.403598
9 96 0 8 0.467332
9 98 0 8 0.466716
9 100 0 8 0.396946
9 103 0 8 0.44945
10 19 0 8 0.643812
10 20 0 8 0.81349
10 21 0 8 0.515322
10 22 0 8 0.806263
10 23 0 8 0.528377
10 24 0 8 0.476357
10 25 0 8 0.437997
10 26 0 8 0.431439
10 28 0 8 0.585192
10 29 0 8 0.40916
10 30 0 8 0.661901
10 31 0 8 0.810344
10 32 0 8 0.641381
10 33 0 8 0.561303
10 34 0 8 0.779304
10 35 0 8 0.555769
10 36 0 8 0.661336
10 37 0 8 0.416361
10 38 0 8 0.535924
10 39 0 8 0.404488
10 41 0 8 0.469471
10 42 0 8 0.422026
10 46 0 8 0.578868
10 49 0 8 0.58187
10 50 0 8 0.523729
10 53 0 8 0.510139
10 54 0 8 0.450374
10 64 0 8 0.493208
10 67 0 8 0.500134
10 68 0 8 0.458178
10 72 0 8 0.472863
10 78 0 8 0.46091
10 82 0 8 0.445724
10 85 0 8 0.466296
10 86 0 8 0.411769
10 89 0 8 0.401415
10 92 0 8 0.418843
10 93 0 8 0.414299
10 96 0 8 0.457798
10 98 0 8 0.455974
10 100 0 8 0.396713
10 103 0 8 0.435848
11 20 0 8 0.809862
11 21 0 8 0.51241
11 22 0 8 0.801037
11 23 0 8 0.541875
11 24 0 8 0.525413
11 25 0 8 0.485148
11 26 0 8 0.459976
11 27 0 8 0.399711
11 28 0 8 0.596749
11 29 0 8 0.417517
11 30 0 8 0.658034
11 31 0 8 0.785256
11 32 0 8 0.617503
11 33 0 8 0.556461
11 34 0 8 0.763568
11 35 0 8 0.534607
11 36 0 8 0.656172
11 37 0 8 0.422689
11 38 0 8 0.546125
11 39 0 8 0.406921
11 41 0 8 0.459575
11 42 0 8 0.41223
11 46 0 8 0.583153
11 49 0 8 0.570398
11 50 0 8 0.506952
11 53 0 8 0.502999
11 54 0 8 0.447309
11 64 0 8 0.464588
11 67 0 8 0.472716
11 68 0 8 0.430801
11 72 0 8 0.445145
11 78 0 8 0.431878
11 82 0 8 0.404014
11 85 0 8 0.437326
11 96 0 8 0.419839
11 98 0 8 0.426742
11 103 0 8 0.410989
12 21 0 8 0.42518
12 22 0 8 0.57758
12 23 0 8 0.570076
12 24 0 8 0.626083
12 25 0 8 0.560095
12 26 0 8 0.494268
12 27 0 8 0.413265
12 28 0 8 0.515092
12 30 0 8 0.534289
12 31 0 8 0.49017
12 32 0 8 0.518689
12 33 0 8 0.492782
12 34 0 8 0.615074
12 35 0 8 0.515966
12 36 0 8 0.522262
12 37 0 8 0.436701
12 38 0 8 0.546061
12 39 0 8 0.399449
12 41 0 8 0.41008
13 22 0 8 0.546715
13 23 0 8 0.63126
13 24 0 8 0.649004
13 25 0 8 0.565571
13 26 0 8 0.456544
13 28 0 8 0.396079
13 30 0 8 0.435917
13 31 0 8 0.400259
13 32 0 8 0.51184
13 33 0 8 0.518126
13 34 0 8 0.609676
13 35 0 8 0.577597
13 36 0 8 0.542256
13 37 0 8 0.481157
13 38 0 8 0.54016
13 39 0 8 0.403112
13 41 0 8 0.411449
14 23 0 8 0.688016
14 24 0 8 0.629691
14 25 0 8 0.531568
14 26 0 8 0.442483
14 28 0 8 0.494966
14 30 0 8 0.584964
14 31 0 8 0.672181
14 32 0 8 0.630613
14 33 0 8 0.617182
14 34 0 8 0.753307
14 35 0 8 0.643225
14 36 0 8 0.643252
14 37 0 8 0.497253
14 38 0 8 0.55555
14 39 0 8 0.416938
14 41 0 8 0.44535
14 42 0 8 0.401817
14 46 0 8 0.431104
14 49 0 8 0.471761
14 53 0 8 0.393661
15 24 0 8 0.687745
15 25 0 8 0.587733
15 26 0 8 0.491262
15 27 0 8 0.406957
15 28 0 8 0.520198
15 29 0 8 0.409658
15 30 0 8 0.599116
15 31 0 8 0.628752
15 32 0 8 0.653554
15 33 0 8 0.645194
15 34 0 8 0.750578
15 35 0 8 0.68198
15 36 0 8 0.642568
15 37 0 8 0.538609
15 38 0 8 0.593715
15 39 0 8 0.441445
15 40 0 8 0.39951
15 41 0 8 0.461258
15 42 0 8 0.409173
15 49 0 8 0.427551
16 25 0 8 0.639131
16 26 0 8 0.514926
16 27 0 8 0.399215
16 28 0 8 0.499794
16 29 0 8 0.39002
16 30 0 8 0.570701
16 31 0 8 0.59769
16 32 0 8 0.648057
16 33 0 8 0.656782
16 34 0 8 0.754121
16 35 0 8 0.688743
16 36 0 8 0.659054
16 37 0 8 0.554398
16 38 0 8 0.601664
16 39 0 8 0.447403
16 40 0 8 0.394239
16 41 0 8 0.44559
16 42 0 8 0.396705
16 49 0 8 0.436256
17 26 0 8 0.613994
17 27 0 8 0.44557
17 28 0 8 0.540258
17 29 0 8 0.42959
17 30 0 8 0.621459
17 31 0 8 0.682348
17 32 0 8 0.737833
17 33 0 8 0.757632
17 34 0 8 0.834998
17 35 0 8 0.77673
17 36 0 8 0.764405
17 37 0 8 0.661981
17 38 0 8 0.693315
17 39 0 8 0.529987
17 40 0 8 0.452768
17 41 0 8 0.499777
17 42 0 8 0.458491
17 46 0 8 0.483113
17 49 0 8 0.550387
17 50 0 8 0.456479
17 53 0 8 0.475279
17 54 0 8 0.469219
17 67 0 8 0.440392
17 72 0 8 0.391253
17 78 0 8 0.398968
17 85 0 8 0.416422
18 27 0 8 0.457881
18 28 0 8 0.510935
18 29 0 8 0.408353
18 30 0 8 0.584226
18 31 0 8 0.648227
18 32 0 8 0.794547
18 33 0 8 0.824055
18 34 0 8 0.868174
18 35 0 8 0.850472
18 36 0 8 0.829836
18 37 0 8 0.758483
18 38 0 8 0.781176
18 39 0 8 0.617324
18 40 0 8 0.502471
18 41 0 8 0.542939
18 42 0 8 0.494009
18 43 0 8 0.393033
18 49 0 8 0.41731
18 56 0 8 0.398718
19 28 0 8 0.569701
19 29 0 8 0.472544
19 30 0 8 0.677582
19 31 0 8 0.791562
19 32 0 8 0.874393
19 33 0 8 0.881886
19 34 0 8 0.913454
19 35 0 8 0.89079
19 36 0 8 0.871771
19 37 0 8 0.800438
19 38 0 8 0.805183
19 39 0 8 0.65058
19 40 0 8 0.552922
19 41 0 8 0.60327
19 42 0 8 0.553409
19 43 0 8 0.440631
19 46 0 8 0.424897
19 49 0 8 0.502158
19 50 0 8 0.391018
19 53 0 8 0.397025
19 54 0 8 0.393992
19 56 0 8 0.399264
19 67 0 8 0.397107
20 29 0 8 0.573716
20 30 0 8 0.869693
20 31 0 8 0.958444
20 32 0 8 0.942833
20 33 0 8 0.940096
20 34 0 8 0.979095
20 35 0 8 0.91987
20 36 0 8 0.954623
20 37 0 8 0.772372
20 38 0 8 0.818986
20 39 0 8 0.611416
20 40 0 8 0.498859
20 41 0 8 0.618809
20 42 0 8 0.576692
20 43 0 8 0.491498
20 45 0 8 0.474297
20 46 0 8 0.779829
20 49 0 8 0.778018
20 50 0 8 0.725874
20 53 0 8 0.714248
20 54 0 8 0.64975
20 56 0 8 0.48517
20 64 0 8 0.61996
20 65 0 8 0.455691
20 67 0 8 0.65023
20 68 0 8 0.620053
20 71 0 8 0.463936
20 72 0 8 0.625656
20 75 0 8 0.434085
20 78 0 8 0.617322
20 79 0 8 0.494483
20 81 0 8 0.520644
20 82 0 8 0.596279
20 85 0 8 0.615392
20 86 0 8 0.554492
20 89 0 8 0.537222
20 92 0 8 0.52925
20 93 0 8 0.499295
20 96 0 8 0.586011
20 98 0 8 0.587419
20 100 0 8 0.500362
20 101 0 8 0.492696
20 103 0 8 0.579337
21 30 0 8 0.775644
21 31 0 8 0.852772
21 32 0 8 0.891543
21 33 0 8 0.877705
21 34 0 8 0.898267
21 35 0 8 0.841135
21 36 0 8 0.800885
21 37 0 8 0.643328
21 38 0 8 0.66106
21 39 0 8 0.450229
21 41 0 8 0.448408
22 31 0 8 0.970945
22 32 0 8 0.925361
22 33 0 8 0.891064
22 34 0 8 0.958758
22 35 0 8 0.805905
22 36 0 8 0.891963
22 37 0 8 0.500717
22 38 0 8 0.672937
22 39 0 8 0.462236
22 40 0 8 0.405272
22 41 0 8 0.558609
22 42 0 8 0.499138
22 43 0 8 0.428268
22 45 0 8 0.423563
22 46 0 8 0.751678
22 49 0 8 0.779717
22 50 0 8 0.71406
22 53 0 8 0.707492
22 54 0 8 0.598624
22 64 0 8 0.601002
22 65 0 8 0.411199
22 67 0 8 0.607883
22 68 0 8 0.570333
22 71 0 8 0.391497
22 72 0 8 0.581141
22 78 0 8 0.589304
22 79 0 8 0.450394
22 81 0 8 0.501824
22 82 0 8 0.602189
22 85 0 8 0.620543
22 86 0 8 0.532696
22 89 0 8 0.522965
22 92 0 8 0.478346
22 93 0 8 0.451569
22 96 0 8 0.57249
22 98 0 8 0.585205
22 100 0 8 0.483009
22 101 0 8 0.482865
22 103 0 8 0.56568
23 32 0 8 0.860977
23 33 0 8 0.799957
23 34 0 8 0.833957
23 35 0 8 0.665321
23 36 0 8 0.656395
23 37 0 8 0.456852
23 38 0 8 0.565004
23 39 0 8 0.425938
23 40 0 8 0.396962
23 41 0 8 0.491818
23 42 0 8 0.421593
23 46 0 8 0.466566
23 49 0 8 0.541911
23 50 0 8 0.444925
23 53 0 8 0.479454
23 54 0 8 0.415401
24 33 0 8 0.637322
24 34 0 8 0.632645
24 35 0 8 0.48058
24 36 0 8 0.456173
24 38 0 8 0.464607
24 41 0 8 0.414877
25 34 0 8 0.583112
25 35 0 8 0.469427
25 36 0 8 0.439598
25 38 0 8 0.468625
25 41 0 8 0.420877
26 35 0 8 0.539374
26 36 0 8 0.511209
26 37 0 8 0.451169
26 38 0 8 0.519236
26 39 0 8 0.410923
26 40 0 8 0.399499
26 41 0 8 0.440533
27 36 0 8 0.710305
27 37 0 8 0.65358
27 38 0 8 0.684561
27 39 0 8 0.523063
27 40 0 8 0.458413
27 41 0 8 0.48959
27 42 0 8 0.431719
28 37 0 8 0.810654
28 38 0 8 0.833364
28 39 0 8 0.671309
28 40 0 8 0.593951
28 41 0 8 0.651955
28 42 0 8 0.614199
28 43 0 8 0.504633
28 45 0 8 0.513552
28 46 0 8 0.721505
28 49 0 8 0.710808
28 50 0 8 0.60429
28 53 0 8 0.603848
28 54 0 8 0.557916
28 56 0 8 0.468149
28 61 0 8 0.405788
28 64 0 8 0.553576
28 65 0 8 0.413034
28 67 0 8 0.589589
28 68 0 8 0.52208
28 71 0 8 0.438044
28 72 0 8 0.535983
28 75 0 8 0.399896
28 78 0 8 0.545838
28 79 0 8 0.427815
28 81 0 8 0.480681
28 82 0 8 0.461224
28 85 0 8 0.551665
28 86 0 8 0.45364
28 89 0 8 0.447187
28 92 0 8 0.455879
28 93 0 8 0.414486
28 96 0 8 0.462572
28 98 0 8 0.458691
28 100 0 8 0.421272
28 103 0 8 0.45798
29 38 0 8 0.867185
29 39 0 8 0.725113
29 40 0 8 0.626584
29 41 0 8 0.660911
29 42 0 8 0.597583
29 43 0 8 0.462429
29 49 0 8 0.392955
29 56 0 8 0.402185
30 39 0 8 0.733393
30 40 0 8 0.647028
30 41 0 8 0.695958
30 42 0 8 0.646107
30 43 0 8 0.524324
30 45 0 8 0.458247
30 46 0 8 0.632078
30 49 0 8 0.66259
30 50 0 8 0.546844
30 53 0 8 0.552195
30 54 0 8 0.488269
30 56 0 8 0.435194
30 60 0 8 0.393974
30 61 0 8 0.414234
30 64 0 8 0.512947
30 67 0 8 0.524694
30 68 0 8 0.453109
30 72 0 8 0.468
30 78 0 8 0.49841
30 81 0 8 0.441849
30 82 0 8 0.424828
30 85 0 8 0.528361
30 86 0 8 0.405621
30 89 0 8 0.398283
30 92 0 8 0.405233
30 96 0 8 0.421531
30 98 0 8 0.416415
30 103 0 8 0.451645
31 40 0 8 0.590543
31 41 0 8 0.707667
31 42 0 8 0.654332
31 43 0 8 0.526808
31 45 0 8 0.507529
31 46 0 8 0.809058
31 49 0 8 0.809879
31 50 0 8 0.767832
31 53 0 8 0.73219
31 54 0 8 0.59568
31 64 0 8 0.614276
31 65 0 8 0.400388
31 67 0 8 0.607872
31 68 0 8 0.595578
31 72 0 8 0.578443
31 78 0 8 0.605547
31 79 0 8 0.425301
31 81 0 8 0.469912
31 82 0 8 0.661384
31 85 0 8 0.601911
31 86 0 8 0.546966
31 89 0 8 0.507188
31 92 0 8 0.463985
31 93 0 8 0.520037
31 96 0 8 0.557848
31 98 0 8 0.543909
31 100 0 8 0.421414
31 101 0 8 0.435847
31 103 0 8 0.495875
32 41 0 8 0.727372
32 42 0 8 0.674783
32 43 0 8 0.557747
32 45 0 8 0.479975
32 46 0 8 0.728266
32 49 0 8 0.740946
32 50 0 8 0.649334
32 53 0 8 0.672143
32 54 0 8 0.613195
32 56 0 8 0.479638
32 61 0 8 0.391162
32 64 0 8 0.519261
32 65 0 8 0.394101
32 67 0 8 0.580278
32 68 0 8 0.524707
32 71 0 8 0.417619
32 72 0 8 0.531021
32 78 0 8 0.533551
32 79 0 8 0.425976
32 81 0 8 0.468142
32 82 0 8 0.466648
32 85 0 8 0.551569
32 86 0 8 0.460689
32 89 0 8 0.444686
32 92 0 8 0.42637
32 96 0 8 0.470126
32 98 0 8 0.475334
32 100 0 8 0.423753
32 101 0 8 0.396287
32 103 0 8 0.479285
33 42 0 8 0.613633
33 43 0 8 0.476788
33 46 0 8 0.48028
33 49 0 8 0.533406
33 50 0 8 0.408541
33 53 0 8 0.44508
33 54 0 8 0.399157
34 43 0 8 0.602068
34 45 0 8 0.568506
34 46 0 8 0.814955
34 49 0 8 0.808932
34 50 0 8 0.728655
34 53 0 8 0.74136
34 54 0 8 0.659883
34 56 0 8 0.493542
34 58 0 8 0.399094
34 60 0 8 0.404843
34 61 0 8 0.449702
34 62 0 8 0.398063
34 64 0 8 0.681933
34 65 0 8 0.519691
34 67 0 8 0.683207
34 68 0 8 0.620757
34 71 0 8 0.514746
34 72 0 8 0.643877
34 75 0 8 0.47319
34 78 0 8 0.659411
34 79 0 8 0.531628
34 81 0 8 0.600349
34 82 0 8 0.625936
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END