(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0347 Hypothetical protein Atu1540, Agrobacterium tumefaciens, 205 res
                 10        20        30                   40           
                 |         |         |                    |           
   1 ...MTHIYEPRLSRIAIDKLRPTQIAVGFREVELK....RKEW....RE.T..R.KKDGDDFL..
   2 ...MTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHW....KA.L..G.KKARKAAI..
   3 spiMTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHW....KA.L..G.KKARKAAI..
   4 ...MTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHW....KA.L..G.KKARKAAI..
   5 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RKHW....KT.L..N.KRARKAAI..
   6 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RKHW....KA.L..N.KRARKAAI..
   7 ...MTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHW....KS.L..G.KKARRAAI..
   8 ...MALGNDVHLISVALDTLRPTQMTVGYREVKAK....RKHW....KA.L..D.KRARKAAI..
   9 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RKHW....KT.L..G.KRARQAAI..
  10 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RRHW....KA.L..D.KRARKAAI..
  11 stmTTNAREPRVHPVPILSLRPTQMTVGMREVKEK....RKRW....RE.H..D.SKKQADLL..
  12 ...MALGNDVHLIPVKLEELRPTQMTVGYREVKAK....RKHW....KA.L..S.KRARKAAI..
  13 ...MTNPREPLLHTIPILSLRPTQMTVGMREVKEK....RLRW....RQ.H..K.PKKQAELL..
  14 ...MANTREPLLHPVPILSLRPTQMTVGMREVKDK....RERW....REhK..S.QKKQAELL..
  15 ...MIDPREPIVTPVPVEELRPTQITVGMREVALK....RQMI....RE.Q..DaKKKTGAFL..
  16 ...MANPREPMLHPIPILSLRPTQMTVGLREVEEK....RRRW....RA.H..K.PKKEGRRL..
  17 ...MADIREPVLLTAALTDLHPTQISVGMREVENK....RENW....RE.K..E.DDKKSLYL..
  18 ...MTHIYEPRLSRIAIDKLRPTQIAVGFREVELK....RKEW....RE.T..R.KKDGDDFL..
  19 ...MPTNILPVLHTVSVSTLRPTQMTVGLREVARK....RKDI....RA.M..T.VGKTGVFL..
  20 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKL....AG.K..K.PKALERYL..
  21 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKL....AG.K..K.PKALERYL..
  22 edcSPQTSVGSSCELPLAALHPTQQNVGLLQVEDD....QAKL....AG.K..K.PKALERYL..
  23 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKL....AG.K..K.PKALERYL..
  24 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKL....AG.K..K.PKALERYL..
  25 hnnRRRNAMPKLHESRIHDLRPTQLTVGMIEVQAK....KTHL....AA.M..A.PADQQAFM..
  26 qpiPEAGRKTELIEIPIASLQPTQWCVGLAEVWAR....QEDF....AS.E..T.RQQRLDYL..
  27 ...-----MPKLHESRIHDLRPTQLTVGLIEVQDK....KTHL....AA.M..A.PADQQAFM..
  28 qpiPAPDRGTELIEVSASQLRPTQWCVGLAEIWSR....EKDF....AQ.D..T.RQQRLDYL..
  29 qniPKPTPDTPLVEVSVAALRPTQWCVGYAEVWAR....QVDF....SS.D..S.RQTRLDYL..
  30 eecSSHSPLDSWCELPLAALHPTQQNVGLLQVEDE....QAKL....AG.K..K.PKALERYL..
  31 dsiPDHDKNHPLFEVKVNDLQPTQMCVGLTEVWSR....QQDF....HD.Q..S.PKDRLRYL..
  32 yepIPKAEGVELFEVAVAALQPTQLCIGLAEIRSR....QHDF....AR.D..T.LEQQRRYL..
  33 ...-----MPKIRESLIHDLHPTQLTVGMIEVQDK....KTHL....AS.L..K.PKDQQAFM..
  34 plpPPPEEPDSLIEVAVAELRPCQLCIGLAEIRHR....QADF....AR.E..S.PKERRRYL..
  35 mraPRTLRDDSKLMVPLDALRPTQITVGAYHVQQK....VHLT....RR.V..P.PARRHAFL..
  36 ...--------------------------------....----....--.-..-.-----AAI..
  37 kqiSTPSSESDLFKVQVKTLLPTQMCIGLAEVINR....KKDF....LI.D..N.KREILEYL..
  38 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRY....ER.Q..P.DKKFDDFCa3
  39 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRY....ER.Q..P.DKKFDDFCa3
  40 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRY....ER.Q..P.DKKFDDFCa3
  41 svpARTRRRGKAI-AELARLRPTQLTLGILHMRHKmavtRKHQ....DS.G..D.RAALRRFL..
  42 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRY....ER.Q..P.DKKFDDFCa3
  43 pgkWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYK....LGRY....EL.Q..P.DKKFDDFCa3
  44 pgkWKNTRTGDMLDVALGELRPTQGALGYDQIYYK....LGRY....ER.Q..P.DKKFDDFCa3
  45 pgkWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYK....LGRY....EL.Q..P.DKKFDDFCa3
  46 pgkWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYK....LGRY....EL.Q..P.DKKFDDFCa3
  47 ...-------------MAQLQPTQWCVGLAEVKSR....QLDF....RG.Q..S.PNDQKKYL..
  48 atpTTTATTPSVY-CEIDKLRPTQCAVGMKHVNRK....VNELlelkES.Q..G.VDKVATFL..
  49 pfeLPPLARQELLELPISRLQPTQLCLGLAEVRSR....ASDF....AR.E..T.AAERRRYL..
  50 ...MTGPNPDDLREVAIDALHPTQLNLGMDEVKRR....AQQM....AG.L..S.KSALRALL..
  51 ksnYADLKRGDVINVNLDQLLPTQAVISLDEEYYN....LGRY....AE.D..L.KKMYNDLCr3
  52 ktnYAELKRGDVINVNLDQLLPTQAVISLDEEYYN....LGRY....AE.D..L.KTMYNDLCr3
  53 dqrFLNAKAGDVIEVEIADLIPTQGAIGYDQIYYK....LGRW....QG.DwnR.PTWQSDASs5


         50            60         70               80                 9
         |             |          |                |                  
   1 ...GNHIV..P.VVAGP.KDR.AYLIDHHHL...VLALSKE...G.VE.HV.....LTSEV...A
   2 ...ESHWF..P.AVLGP.GGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
   3 ...ESHWF..P.AVLGP.GGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
   4 ...ESHWF..P.AVLGP.CGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
   5 ...ESHWF..P.AVLGP.DGL.HYITDHHHL...GLALIEE...G.EA.RV.....NAMLL...K
   6 ...ESHWF..P.AVLGP.DGL.HYITDHHHL...GLALIEE...G.EA.RV.....NAMLL...K
   7 ...DSHWF..P.AVLGP.GGH.YFITDHHHL...GLALIEE...G.VT.EV.....KAMLL...K
   8 ...ESHWF..P.AVLGP.GGE.HYITDHHHL...GLALIEE...G.ES.RV.....NAMLL...K
   9 ...ESHWF..P.AVLGP.GGL.HYITDHHHL...GLALIEE...G.ET.RV.....NAMLL...K
  10 ...DSHWF..P.AVLGP.GGL.YYITDHHHL...GLALIEE...G.QT.RV.....NAMLL...K
  11 ...GKHMI..P.VVYGP.DKR.YYVIDHHHL...GRALHDE...G.VK.EV.....LVTVV...G
  12 ...ESHWF..P.AVLGP.DGL.HYITDHHHL...GLALIEE...G.EA.RV.....NAMLL...K
  13 ...GNHMI..P.VVLGP.GKT.HYVIDHHHL...ARALHDE...G.VK.EV.....LVTVI...A
  14 ...GKHMI..P.VVLGP.DKR.HYVVDHHHL...ARALHDE...G.VK.DV.....LVSVI...G
  15 ...GKHMV..P.VVLGP.KNR.NYVTDHHHL...ARALLEE...G.VK.DV.....LVTVI...S
  16 ...AEHMI..P.VVLGP.GKR.HYVVDHHHL...ARALHEE...G.IK.DV.....AVTVI...A
  17 ...GSHLI..P.VVLGD.QSQ.PFVVDHHHL...CRALLEE...G.VT.KV.....ALSVM...A
  18 ...GNHIV..P.VVAGP.KDR.AYLIDHHHL...VLALSKE...G.VE.HV.....LTSEV...A
  19 ...AGHSL..P.AVVGP.KGR.YYIVDHHHL...ALALHQE...D.IE.QV.....LLTVI...C
  20 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PKqGV.....PVKVI...G
  21 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PKqGV.....PVKVI...G
  22 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PKqGV.....PVKVI...G
  23 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PKqGV.....PVKVI...G
  24 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PKqGV.....PVKVI...G
  25 ...QAHPI..P.AVLGP.GGQ.LYITDHHHL...GRAALDA...G.VI.TG.....YFMVE...A
  26 ...KGKPV..P.LVRNA.AGE.VWMVDRHHR...LRGLLGL...D.PQsTT.....WGYVI...A
  27 ...QAHPI..P.AVVGP.GGQ.LYITDHHHL...GRAALEA...G.VT.IG.....YFMVE...A
  28 ...RGKPV..P.LIRSA.DGA.MWMLDRHHR...LRGLIGI...D.PGaTT.....WAYVV...Q
  29 ...RKKPV..P.MVRNA.AGS.LWMVDRHHR...LRSLLGI...D.PEaTT.....WGYVI...A
  30 ...RKKEI..P.VVIGP.DGG.FYLTDRHHL...SSALWRL...D.PTrEV.....PVKVI...G
  31 ...RGKPV..P.LVRNR.RGQ.LWMVDRHHR...LRALLEL...D.RSvTS.....FGYVI...A
  32 ...RSKPV..P.LVRNQ.TGD.LWMIDRHHR...LRALLEL...N.ASvTT.....FGYLV...A
  33 ...EAHPI..P.AVEGP.GGK.LYITDHHHL...GRAALEA...G.LT.SG.....FFMVE...A
  34 ...RRKPV..P.LVRDA.SGA.LWMVDRHHR...LRGLLEL...E.PDtTA.....FGYVI...L
  35 ...DQHRV..H.VVIAP.EQA.LYVVDHHHW...VRAWHDL...G.LS.HV.....PAIVR...K
  36 ...ESHWF..P.AVLGP.GGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
  37 ...KTKPV..P.LVSNG.NGN.FWMLDRHHR...LRALLEA...DeHA.EA.....YGYIV...T
  38 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AAlRV.....HVVVK...D
  39 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AAlRV.....HVVVK...D
  40 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AAlRV.....HVVVK...D
  41 ...RCHRV..K.TVSGP.GGT.LFIVDHHHW...ARAWLEL...G.FR.RV.....PVRIL...H
  42 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AAlRV.....HVVVK...D
  43 4naRDRSVlnP.VVIGP.NGDaLYLTDGHHG...LSTYYETpdgG.PAlHV.....HVVVK...D
  44 3daRDRTVlnP.VVIGP.NGDtLYVTDGHHG...LSTYYETpdgG.AAlRV.....HVVVK...D
  45 4naRDRSVlnP.VVIGP.NGDaLYLTDGHHG...LSTYYETpdgG.PAlHV.....HVVVK...D
  46 4naRDRSVlnP.VVIGP.NGDaLYLTDGHHG...LSTYYETpdgG.PSlHV.....HVVVK...D
  47 ...KGKPV..P.LVGNG.SGS.LWMIDRHHR...LRALLDL...D.QDaTT.....YGYLI...E
  48 ...KSHAA..P.VVL-K.DDQ.VFLIDNHHL...CRALYEL...G.GD.YFk17imFINVV...S
  49 ...RTRPV..P.VAVSS.AGE.HWMIDRHHR...LRALMEV...D.SSaTA.....FCSVV...L
  50 ...VKKAV..P.YVIGP.KKR.LYMTDHHHL...CRALLLA...G.HD.TV.....LVAKPrdgA
  51 1geNIDAL..PaVIIGPkDGE.LFLIDHHNI...LSTFWDMpn.G.GT.SV.....PITLK...V
  52 1geNIDAL..PsVIIGPeDGE.LFLIDHHNI...LSTFWDMpn.G.GT.SV.....PITLK...V
  53 7laDLKTV..-.-VVGY.DGR.LYLTDGHHTmtqLRELPDG...G.ASlKV.....WVRVV...E


      0         100       110        120            130         140    
     |           |         |          |              |           |    
   1 KFSHL.G.KDEFWSVMDHRNLIYPFDAQGL.RRQSGDIPKNIH.....D..LEDDPFRSLAGALR
   2 DLSWL.D.ETIFWRMMEHNQWVHPFGANGA.RHDYDHLPTSLV.....G..LKDDPYRSLAGELR
   3 DLSWL.D.ETIFWRMMEHNQWVHPFGANGA.RHDYDHLPTSLV.....G..LKDDPYRSLAGELR
   4 DLSWL.D.ETIFWRMMEHNQWVHPFGANGA.RHDYDHLPTSLV.....G..LKDDPYRSLAGELR
   5 DLSWL.D.DTIFWRMMEHNQWVHPFGPDGS.RRDYAHLPKALT.....G..LEDDPYRSLAGELR
   6 DLSWL.D.DTIFWRMMEHNQWVHPFGPDGS.RRDYAHLPKVLT.....G..LEDDPYRSLAGELR
   7 DLSWL.D.ETLFWRMMEHNQWVHPFGANGA.RHDYDHLPTSLV.....G..LKDDPYRSLAGELR
   8 DLSWL.D.DTIFWRMMEHNQWVHPFDADGA.RRDYAELPKVLT.....A..LDDDPYRSLAGELR
   9 DLSWL.D.DTIFWRIMEHNQWVHPFGPDGA.RREYAHLPQALT.....G..LEDDPYRSLAGELR
  10 DLSWL.E.DTIFWRMMEHNQWVHPFGPDGS.RRDYANLPKVLT.....G..LEDDPYRSLAGELR
  11 DLRMV.E.REAFWGVMDNKRWVYPYDSKGE.RRPFRDLPKSVA.....D..LRDDPFRSLAGELR
  12 DLSWL.D.ETIFWRMMEHNQWVHPFGADGT.RRDYGNLPKALT.....G..LVDDPYRSLAGELR
  13 DLSMV.D.REAFWVVLDSRRWVYPYDAKGE.RHHYREIPKTVA.....G..LKDDPFRSLAGELR
  14 DLSMV.D.RDGFWNVMDNKRWVYPYDAKGE.RRHFKDLPKTVA.....D..LKDDPFRSLAGELR
  15 DLSAL.D.KDTFLFVLDNRGWMHPFDESGR.RRDYSAIPKTIG.....E..LIDDPYRSMAGELR
  16 DLSMV.D.RDAFWVVLDSRRWVYPYDAKGE.RHHYKDLPKTVA.....A..LKDDPFRSLAGELR
  17 DLSSL.E.KDHFWFVMDSQRWMHPFDEKGI.RRSYQDIPDSLT.....E..MKDDPYRSLAGSLR
  18 KFSHL.G.KDEFWSVMDHRNLIYPFDAQGL.RRQSGDIPKNIH.....D..LEDDPFRSLAGALR
  19 DLSAL.D.KDAFLIVLDNRAWMHPFDASGR.RRPYNDLPKSVD.....K..LVDDPFRSLAGEVR
  20 RLP--.Q.ASDFWEKMQENHWVWLHDARGA.EIPPEALPDALA.....G..LGDDPYRALAGYAE
  21 RLP--.Q.ASDFWEKMQENHWVWLHDARGA.EIPPEALPDALA.....G..LGDDPYRALAGYAE
  22 RLP--.Q.ASDFWEKMQENHWVWLHDARGA.EIPPEALPNALA.....G..LGDDPYRALAGYAE
  23 RLP--.Q.ASDFWEKMQENHWVWLHDARGA.EIPPEALPNALA.....G..LGDDPYRALAGYAE
  24 RLP--.Q.ATDFWKKMQENHWVWLHDARGA.EIPPEALPDALA.....G..LGDDPYRALAGYAE
  25 DLSQH.S.LDDFWKAMDQNLWVHPLDEHGV.RHYYASIPKHLE.....K..LVDDPYRSLAGYVR
  26 ELHCS.D.RSEVLRFLEQQGWLYLIDGRGAgPRQPMELPRTLL.....D..LEDDPYRSLVWKLK
  27 DLSKN.S.LDDFWKAMDQNLWVHPLDEHGV.RHYYASIPDHLE.....K..LVDDPYRSLAGYVR
  28 DLPTA.D.RSSVLTYLHNQGWLYLYDGRGNgPRPAEQLPMSLL.....G..LDDDPYRSLVWKLK
  29 EVDDQ.N.PTAAITYLQTQGWLYLYDSRGQgPRHPSELPRSLL.....T..LEDDPYRSLVWKLK
  30 RLS--.Q.GSDFWEKMQENHWVWLHDAHGA.PIPPAALPDDLA.....G..LGNDPYRALAGYAE
  31 ELESE.S.RESALEALQKRGWLYLFDGRGNgPKPATELPHTLL.....G..LQDDPYRSLVWKLK
  32 EVASS.S.RAETLRELQSRGWLYLHDGRGQgPWPPEQLPTSLL.....D..LQDDPYRSLVWKLK
  33 DLSTS.A.PGDFWGEMDKNQWVHPLDENGV.RHCYTLIPSHLE.....K..LIDDPYRSLAGYVR
  34 QLASH.D.PSAALEALAQRGWLYLHDGRGQgPWPPERLPQSLL.....S..LDDDPYRSLVWKLK
  35 DLSSM.K.EQAFWEWMLDNHMVHPYDEHGR.RRPLSELPECIH.....A..MRDDPYRSLEAFVQ
  36 DLSWL.D.ETIFWRMMEHNQWVHPFGANGA.RHDYDHLPTSLV.....G..LKDDPYRSLAGELR
  37 EVKTN.Q.VSHMLDFLDEQGWLYLYNSRGLgPHPTKYLKENLL.....E..LEDDPYRSLVWKLK
  38 NLADY.S.AAAFWQQMQNRGYTRLKDGDGR.PIAPDRLPTGLGlkr..G..MQDDRYRSLVYFTR
  39 NLADY.S.AAAFWQQMQNRGYTRLKDGDGR.PIAPDRLPAGLGlkr..G..MQDDRYRSLVYFTR
  40 NLADY.S.AAAFWQQMQNRGYTRLKDGDGR.PIAADRLPAGLGlkr..G..MQDDRYRSLVYFTR
  41 DLSGL.S.PTAFWKRMRALGFVHPYDELGQ.RLGIDALPATVM.....G..MRDDPYRSLAAFAR
  42 NLADY.S.AAAFWQQMQNRGYTRLKDGDGR.PIAPDRLPAGLGlkr..G..MQDDRYRSLVYFTR
  43 NLSDY.S.GDAFWQQMQSRGYLRLKNGEGK.PITTAQLPTGLGlkl..G..MTNDRYRSLVYFTR
  44 NLGDY.S.GAAFWQQMQRRSYTRLKDGDGR.PIAPDQLPAGLGlkl..G..MQDDRYRSLVYFTR
  45 NLSDY.S.GDAFWQQMQSRGYLRLKNGEGQ.PITTAQLPSGLGlkl..G..MTNDRYRSLVYFTR
  46 NLSDY.S.GDAFWQQMQSRGYLRLKNGEGK.PITTAQLPSGLGlkl..G..MTNDRYRSLVYFTR
  47 NCPTE.D.DLESLQLLADRGWLYLYNGRGHgPLLPQGLPKSLL.....M..LEDDPYRSLAWKLK
  48 DLSDLkD.NSQFWNKMNSEKWVHPYNKNGEgPLDVNEIPKKVC.....E..LEDDVFRSIAAVVK
  49 ELVGA.S.RAHCLEELNRRGWLYLRDGEGRgPLPPERLPMDLG.....G..LEDDPFRSLVWKLK
  50 DWSDL.D.LPTFWHRMESQGLCWPIDVDGN.RRPCIKIPGHIS.....E..LTDNPWRTLARGVR
  51 EYNLLgS.GDDFWPELLNDHEVWLYNNKGE.KIKPSALPQYIG.....SkqLKHDKYFSLAYFLD
  52 EYNLLgS.GDDFWPELLNDHEVWLYNNKGK.KIKPSALPQYIG.....SkqLKHDKYFSLAYFLN
  53 NDSNL.KtADAFWNKMVTDGRVWLRNGQNQ.PILYTQLPQNLGlk8pnG..MEESQHRSLMYFLR


            150          160        170            180          190    
             |            |          |              |            |    
   1 ..MAGGY.AKV..IIP.FSEFGWADFLR.RRID.R.DLLS.D.S.FDD...ALAEAMKLAKSREA
   2 ..AAGGY.AKD..ATP.FSEFLWADFLR.PRIA.L.AQIR.K.E.FAK...ALEAALGYAHTQEA
   3 ..AAGGY.AKD..ATP.FSEFLWADFLR.PRIA.L.AQIR.K.E.FAK...ALEAALGYAHTQEA
   4 ..AAGGY.AKD..ATP.FSEFLWADFLR.PRIA.L.AQIR.K.E.FAK...ALEAALGYAHTQEA
   5 ..TAGGY.AKD..ATP.FSEFLWADYLR.QHVS.L.DQIR.K.N.FAK...ALDIALHRAHEQDA
   6 ..TAGGY.AKD..ATP.FSEFLWADYLR.QHVS.L.DQIR.K.N.FAK...ALDIALQRAHEQDA
   7 ..TAGGY.AKD..AMP.FSEFLWADFLR.TKIA.L.TQIR.K.E.FAK...ALEAALGYAHTQEA
   8 ..TAGGY.AKD..ATP.FSEFLWADYLR.QHVS.V.DQIR.K.S.FSK...ALDAALRRAHDQDA
   9 ..TAGGY.AKD..ATP.FSEFLWADYLR.QHVS.L.DQIR.K.N.FDK...ALDLSLRRAHDQDA
  10 ..TAGGY.AKD..ATP.FSEFLWADYLR.QHVT.L.DQIR.K.N.FSK...ALDLSLRRAHDQDA
  11 ..RLGGF.AKD..TTP.FSEFLWADYLR.RKLS.R.KAVD.A.N.FDK...ALEKALSAAKSKDA
  12 ..TAGGY.AKD..ATP.FSEFLWADYLR.QHVS.L.DQIR.K.N.FAK...ALDIALHRAHEQDA
  13 ..RVGGY.AKD..TTP.FSEFLWADFLR.RRLS.R.KSVT.A.N.FQN...AAEKALALAKSKDA
  14 ..RAGGF.AKD..TTP.FSEFLWADFLR.RRVK.R.KTVE.S.H.FAA...AMEHALALAKSHDA
  15 ..RMGGF.AKD..TTP.FSEFIWADFLR.RRID.R.NAVA.K.N.FDK...AMKEALSLAKGKDA
  16 ..RIGGY.AKD..TTP.FSEFLWADFLR.RRLS.R.KSVD.A.D.FAK...ATELSLALAKSRDA
  17 ..RAGGY.AKD..VTP.FSEFLWADYLR.RQFN.G.ADIA.H.N.FND...FLEKALILAHDKKA
  18 ..MAGGY.AKV..IIP.FSEFGWADFLR.RRID.R.DLLS.D.S.FDD...ALAEAMKLAKSREA
  19 ..RLGGY.AKD..TTP.FAEFLWADFFR.RRMD.A.RGLE.D.D.FHK...AATHALRLARQKSA
  20 ..DENAF.DKD..RQSyFIEFHWARYFG.ERMHwR.PISR.A.T.LPD...DLKQALRLACEPAA
  21 ..DENAF.DKD..RQSyFIEFHWARYFG.ERMHwR.PISR.A.T.LPD...DLKQALRLACEPAA
  22 ..DENAF.DKD..RQSyFIEFHWARYFG.ERMHwR.PISR.A.T.LPD...DLKQALHLACEPAA
  23 ..DENAF.DKD..RQSyFIEFHWARYFG.ERMHwR.PISR.A.T.LPD...DLKQALHLACEPAA
  24 ..DENAF.DKD..RQSyFIEFHWARYFG.ERMHwR.PISR.A.T.LPD...DLKQALRLACEPAA
  25 ..DAGGY.DKT..PTA.FAEFVWADFFR.RSIP.I.EDLL.A.D.FQA...AVHAALPLAKSKFA
  26 ..KEGFIkPQP..QIP.YHEFRWGAWLR.RRPL.P.PFSS.R.Q.LQP...ALAPARRLVCSQAA
  27 ..NAGGY.DKT..PTA.FAEFVWADFFR.RSIP.I.EDLL.A.D.FQA...AVRAALPLAKSKFA
  28 ..QEGWIkPQP..LIP.YHEFRWGAWLR.SRPL.P.PFSS.R.R.LEP...ALAAARQLVCSAAA
  29 ..QEGLIkPQA..HIP.YHEFRWAAWLR.QRPL.P.PFSS.R.Q.LEP...ALAPARRLVCSESA
  30 ..DENAF.DKD..RRSyFIEFHWARYFG.ERMHwR.PISR.A.S.LPG...DLEEALRLACEPAA
  31 ..KEGLIkPQP..LIP.YHEFRWGSWLR.TRPL.P.PFSS.A.R.LEP...ALPAARCLARSAAA
  32 ..KEGVLrPQP..LIP.YHEFRWGAWLR.RRPL.P.PFHS.G.C.LEP...ALPTARRLARSPAA
  33 ..DAGGY.QKT..PTA.FAEFVWADFFR.RHIA.V.EDLK.A.D.FQA...AVKCAKVLAASKWA
  34 ..QEKVIsPAP..LIP.FHEFRWGAWLR.SRCL.P.PFSS.L.C.LEP...ALPAARALARSAAG
  35 ..LAGGY.RKV..KQA.YPDFKWADFFR.RHVE.G.PLDS.P.EmFAA...ALVRAFQLAQSPKA
  36 ..AAGGY.AKD..ATP.FSEFLWADFLR.PRIA.L.AQIR.K.E.FAK...ALEAALGYAHTQEA
  37 ..QEGIIkAKP..LIP.YHEFRWAAWLR.KRPL.P.PFNS.R.N.LTP...ALTKARKFTTSQAA
  38 ..DIG-Y.AKPaqATD.YLEFYWADWLR.QQPHaF.PLAG.Y.D.LTR...AGATDPDPATADTG
  39 ..DIG-Y.AKPtqATD.YLEFYWADWLR.QQPQaF.PLAG.Y.D.LTR...AGATDPDPATADTG
  40 ..DIG-Y.AKPaqATD.YLEFYWADWLRqQRQA.F.PLAG.Y.D.LTR...AGATDPDPATADTG
  41 ..QSGAY.RKP..PDA.YGDFRWAGFLR.ERIE.E.DMGTiG.G.FAL...ALSQAIRLARGSAA
  42 ..DIG-Y.AKPaqATD.YLEFYWADWLR.QQPQaF.PLAG.Y.D.LTR...AGATDPDPATADTG
  43 ..DIG-Y.SKPaqATD.YLEFYWADWLR.AQPGtF.ALTG.Y.D.LTR...AGTTDPDPAKADTG
  44 ..DIG-Y.AKPaqATD.YLEFYWADWLR.QQPEtF.SLAG.Y.D.LAR...AGATDPDPANADTG
  45 ..DIG-Y.SKPaqATD.YLEFYWADWLRaQPCT.F.ALAN.Y.D.LTR...GGTTDPDPAKADTG
  46 ..DIG-Y.SKPaqATD.YLEFYWADWLR.AQPGtF.ALAN.Y.D.LTR...GGTTDPDPAKADTG
  47 ..SEGLIrPEP..LIP.YHEFRWGTWLR.SRAL.P.PFSS.K.Y.LEP...ALPAARSLVRSNAA
  48 ..IKGGF.KKS..FIP.YAEFQWANYFR.SCFE.N.KKVD.D.NnFDK...VIDESLELAKNEEA
  49 ..QEGLIrAQP..QVP.FLEFHWGSWLR.HQNL.P.AFGS.M.D.LSP...ALPEARRLVRGQVG
  50 ..-GDAY.SNL..DTP.FQEFMWGNYYR.SFMT.T.RLLQ.S.D.IEL...AEKLAVKLSRLDEA
  51 giAYDMP.DEN..KVP.YVKLNWSRVLR.EKMD.IgDYNL.N.N.LDEyatALTEAATIITDLES
  52 giAYDMP.DEN..KVP.YVKLNWSRVLR.EKMD.IgDYNL.N.N.LDEyatALTSAATIITDLKS
  53 ..DIG-Y.SKPekATD.FLEFLWQDWFE.NQAK.L.GLVK.PlS.F--...--------------


         200         
          |         
   1 RHLPGWCGVE....E
   2 RYLPGWSGVIaap.R
   3 RYLPGWSGVIaap.R
   4 RYLPGWSGVIaap.R
   5 RYLPGWSGVIavk.P
   6 RYLPGWSGVIavk.P
   7 RYLPGWSGVIaap.R
   8 RYLPGWSGVVavk.P
   9 RYLPGWSGVIavk.P
  10 RYLPGWSGVIaak.P
  11 IYLPGWCGPAdd..D
  12 RYLPGWSGVIavk.P
  13 IYLPGWCGPAad..D
  14 VYLPGWCGPAsd..D
  15 DYLPGWCGPTs...D
  16 IYLPGWCGPAfd..D
  17 SYLPGWCAPQvkhv-
  18 RHLPGWCGVE....E
  19 GYLPGWSGPD....N
  20 RELPGYRQDCph..G
  21 RELPGYRQDCp...H
  22 RELPGYRQDCp...H
  23 RELPGYRQDCp...H
  24 KELPGYRQDCp...R
  25 KALPGYNGK-....-
  26 STMAGWKGDKkac.R
  27 HALPGYNGK-....-
  28 QDMPGWKGDKkac.R
  29 RNMAGWKGEKqpd.S
  30 KELPGYRQDCp...R
  31 RHLAGWRGGA....D
  32 LHLAGWKEEA....-
  33 SGLPGFQAK-....-
  34 SRLAGWRG--....-
  35 RGLPGFIEKPptc.-
  36 RYLPGWSGVIaap.R
  37 SSLAGWTGDKi...-
  38 -YLNAVWNASarmv-
  39 -YLNAVWNASarmv-
  40 -YLNAVWNASarmv-
  41 RRLPGYCGGAa...S
  42 -YLNAVWNASarmv-
  43 -YLNAVWNAStrmv-
  44 -YLNAVWNASarmv-
  45 -YLNAVWNAStrmv-
  46 -YLNAVWNAStrmv-
  47 SHLDGWIG--....-
  48 KKLPGYIDN-....-
  49 LGGPPAS---....-
  50 QDLPGYLGPK....-
  51 DTVIGKSEKIakem-
  52 DTVIGRSSKTakem-
  53 ----------....-