(c) 1992-2000 Regents of the University of California, Santa Cruz
Sequence Alignment and Modeling Software System
http://www.soe.ucsc.edu/research/compbio/sam.html

Citations (SAM, SAM-T99, HMMs)

Sequence numbers correspond to the following labels:

    • T0347 Hypothetical protein Atu1540, Agrobacterium tumefaciens, 205 res
                 10        20        30               40               
                 |         |         |                |               
   1 ...MTHIYEPRLSRIAIDKLRPTQIAVGFREVELK....RKEWRE.T..R.K....KDGDDFL..
   2 ...MTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHWKA.L..G.K....KARKAAI..
   3 spiMTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHWKA.L..G.K....KARKAAI..
   4 ...MTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHWKA.L..G.K....KARKAAI..
   5 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RKHWKT.L..N.K....RARKAAI..
   6 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RKHWKA.L..N.K....RARKAAI..
   7 ...MALGNDVHLISVALDTLRPTQMTVGYREVKAK....RKHWKA.L..D.K....RARKAAI..
   8 ...MTIGQDVHLIPAKLDALRPTQITVGYREVKAK....RKHWKS.L..G.K....KARRAAI..
   9 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RKHWKT.L..G.K....RARQAAI..
  10 ...MALGNDVHLIPVRLDALRPTQMTVGYREVKAK....RRHWKA.L..D.K....RARKAAI..
  11 stmTTNAREPRVHPVPILSLRPTQMTVGMREVKEK....RKRWRE.H..D.S....KKQADLL..
  12 ...MALGNDVHLIPVKLEELRPTQMTVGYREVKAK....RKHWKA.L..S.K....RARKAAI..
  13 ...MTNPREPLLHTIPILSLRPTQMTVGMREVKEK....RLRWRQ.H..K.P....KKQAELL..
  14 ...MIDPREPIVTPVPVEELRPTQITVGMREVALK....RQMIRE.Q..DaK....KKTGAFL..
  15 ...MANTREPLLHPVPILSLRPTQMTVGMREVKDK....RERWREhK..S.Q....KKQAELL..
  16 ...MANPREPMLHPIPILSLRPTQMTVGLREVEEK....RRRWRA.H..K.P....KKEGRRL..
  17 ...MADIREPVLLTAALTDLHPTQISVGMREVENK....RENWRE.K..E.D....DKKSLYL..
  18 ...MTHIYEPRLSRIAIDKLRPTQIAVGFREVELK....RKEWRE.T..R.K....KDGDDFL..
  19 ...MPTNILPVLHTVSVSTLRPTQMTVGLREVARK....RKDIRA.M..T.V....GKTGVFL..
  20 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKLAG.K..K.P....KALERYL..
  21 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKLAG.K..K.P....KALERYL..
  22 edcSPQTSVGSSCELPLAALHPTQQNVGLLQVEDD....QAKLAG.K..K.P....KALERYL..
  23 hnnRRRNAMPKLHESRIHDLRPTQLTVGMIEVQAK....KTHLAA.M..A.P....ADQQAFM..
  24 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKLAG.K..K.P....KALERYL..
  25 edcSPQTSVGSWCELPLAALHPTQQNVGLLQVEDD....QAKLAG.K..K.P....KALERYL..
  26 ...-----MPKLHESRIHDLRPTQLTVGLIEVQDK....KTHLAA.M..A.P....ADQQAFM..
  27 qniPKPTPDTPLVEVSVAALRPTQWCVGYAEVWAR....QVDFSS.D..S.R....QTRLDYL..
  28 qpiPEAGRKTELIEIPIASLQPTQWCVGLAEVWAR....QEDFAS.E..T.R....QQRLDYL..
  29 qpiPAPDRGTELIEVSASQLRPTQWCVGLAEIWSR....EKDFAQ.D..T.R....QQRLDYL..
  30 dsiPDHDKNHPLFEVKVNDLQPTQMCVGLTEVWSR....QQDFHD.Q..S.P....KDRLRYL..
  31 eecSSHSPLDSWCELPLAALHPTQQNVGLLQVEDE....QAKLAG.K..K.P....KALERYL..
  32 ...-----MPKIRESLIHDLHPTQLTVGMIEVQDK....KTHLAS.L..K.P....KDQQAFM..
  33 yepIPKAEGVELFEVAVAALQPTQLCIGLAEIRSR....QHDFAR.D..T.L....EQQRRYL..
  34 plpPPPEEPDSLIEVAVAELRPCQLCIGLAEIRHR....QADFAR.E..S.P....KERRRYL..
  35 mraPRTLRDDSKLMVPLDALRPTQITVGAYHVQQK....VHLTRR.V..P.P....ARRHAFL..
  36 ...--------------------------------....------.-..-.-....----AAI..
  37 kqiSTPSSESDLFKVQVKTLLPTQMCIGLAEVINR....KKDFLI.D..N.K....REILEYL..
  38 isvPARTRRRGKAIAELARLRPTQLTLGILHMRHKmavtRKHQDS.G..D.R....AALRRFL..
  39 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRYER.Q..P.D....KKFDDFCa3
  40 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRYER.Q..P.D....KKFDDFCa3
  41 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRYER.Q..P.D....KKFDDFCa3
  42 pgkWKNARAGDMLEVTLGELRPTQGALGYDQIYYK....LGRYER.Q..P.D....KKFDDFCa3
  43 matPTTTATTPSVYCEIDKLRPTQCAVGMKHVNRK....VNELLE.L..K.EsqgvDKVATFL..
  44 pgkWKNTRTGDMLDVALGELRPTQGALGYDQIYYK....LGRYER.Q..P.D....KKFDDFCa3
  45 pgkWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYK....LGRYEL.Q..P.D....KKFDDFCa3
  46 ...-------------MAQLQPTQWCVGLAEVKSR....QLDFRG.Q..S.P....NDQKKYL..
  47 pgkWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYK....LGRYEL.Q..P.D....KKFDDFCa3
  48 pgkWKAARAGDLIDVTLGDLHPTQGAIGYDQIYYK....LGRYEL.Q..P.D....KKFDDFCa3
  49 pfeLPPLARQELLELPISRLQPTQLCLGLAEVRSR....ASDFAR.E..T.A....AERRRYL..
  50 ...MTGPNPDDLREVAIDALHPTQLNLGMDEVKRR....AQQMAG.L..S.K....SALRALL..
  51 ksnYADLKRGDVINVNLDQLLPTQAVISLDEEYYN....LGRYAE.D..L.K....KMYNDLCr3
  52 ktnYAELKRGDVINVNLDQLLPTQAVISLDEEYYN....LGRYAE.D..L.K....TMYNDLCr3
  53 dqrFLNAKAGDVIEVEIADLIPTQGAIGYDQIYYK....LGRWQG.DwnR.P....TWQSDASs5


         50            60         70               80                 9
         |             |          |                |                  
   1 ...GNHIV..P.VVAGP.KDR.AYLIDHHHL...VLALSKE...G.VE.HV.....LTSEV...A
   2 ...ESHWF..P.AVLGP.GGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
   3 ...ESHWF..P.AVLGP.GGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
   4 ...ESHWF..P.AVLGP.CGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
   5 ...ESHWF..P.AVLGP.DGL.HYITDHHHL...GLALIEE...G.EA.RV.....NAMLL...K
   6 ...ESHWF..P.AVLGP.DGL.HYITDHHHL...GLALIEE...G.EA.RV.....NAMLL...K
   7 ...ESHWF..P.AVLGP.GGE.HYITDHHHL...GLALIEE...G.ES.RV.....NAMLL...K
   8 ...DSHWF..P.AVLGP.GGH.YFITDHHHL...GLALIEE...G.VT.EV.....KAMLL...K
   9 ...ESHWF..P.AVLGP.GGL.HYITDHHHL...GLALIEE...G.ET.RV.....NAMLL...K
  10 ...DSHWF..P.AVLGP.GGL.YYITDHHHL...GLALIEE...G.QT.RV.....NAMLL...K
  11 ...GKHMI..P.VVYGP.DKR.YYVIDHHHL...GRALHDE...G.VK.EV.....LVTVV...G
  12 ...ESHWF..P.AVLGP.DGL.HYITDHHHL...GLALIEE...G.EA.RV.....NAMLL...K
  13 ...GNHMI..P.VVLGP.GKT.HYVIDHHHL...ARALHDE...G.VK.EV.....LVTVI...A
  14 ...GKHMV..P.VVLGP.KNR.NYVTDHHHL...ARALLEE...G.VK.DV.....LVTVI...S
  15 ...GKHMI..P.VVLGP.DKR.HYVVDHHHL...ARALHDE...G.VK.DV.....LVSVI...G
  16 ...AEHMI..P.VVLGP.GKR.HYVVDHHHL...ARALHEE...G.IK.DV.....AVTVI...A
  17 ...GSHLI..P.VVLGD.QSQ.PFVVDHHHL...CRALLEE...G.VT.KV.....ALSVM...A
  18 ...GNHIV..P.VVAGP.KDR.AYLIDHHHL...VLALSKE...G.VE.HV.....LTSEV...A
  19 ...AGHSL..P.AVVGP.KGR.YYIVDHHHL...ALALHQE...D.IE.QV.....LLTVI...C
  20 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PK.QG.....VPVKV...-
  21 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PK.QG.....VPVKV...-
  22 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PK.QG.....VPVKV...-
  23 ...QAHPI..P.AVLGP.GGQ.LYITDHHHL...GRAALDA...G.VI.TG.....YFMVE...A
  24 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PK.QG.....VPVKV...-
  25 ...RKKEI..P.VVIGP.GGR.FYLTDRHHL...SSALWRL...D.PK.QG.....VPVKV...-
  26 ...QAHPI..P.AVVGP.GGQ.LYITDHHHL...GRAALEA...G.VT.IG.....YFMVE...A
  27 ...RKKPV..P.MVRNA.AGS.LWMVDRHHR...LRSLLGI...D.PEaTT.....WGYVI...A
  28 ...KGKPV..P.LVRNA.AGE.VWMVDRHHR...LRGLLGL...D.PQsTT.....WGYVI...A
  29 ...RGKPV..P.LIRSA.DGA.MWMLDRHHR...LRGLIGI...D.PGaTT.....WAYVV...Q
  30 ...RGKPV..P.LVRNR.RGQ.LWMVDRHHR...LRALLEL...D.RSvTS.....FGYVI...A
  31 ...RKKEI..P.VVIGP.DGG.FYLTDRHHL...SSALWRL...D.PT.RE.....VPVKV...-
  32 ...EAHPI..P.AVEGP.GGK.LYITDHHHL...GRAALEA...G.LT.SG.....FFMVE...A
  33 ...RSKPV..P.LVRNQ.TGD.LWMIDRHHR...LRALLEL...N.ASvTT.....FGYLV...A
  34 ...RRKPV..P.LVRDA.SGA.LWMVDRHHR...LRGLLEL...E.PDtTA.....FGYVI...L
  35 ...DQHRV..H.VVIAP.EQA.LYVVDHHHW...VRAWHDL...G.LS.HV.....PAIVR...K
  36 ...ESHWF..P.AVLGP.GGD.YFITDHHHL...GLALLEE...G.VT.EV.....KAMLL...K
  37 ...KTKPV..P.LVSNG.NGN.FWMLDRHHR...LRALLEA...DeHA.EA.....YGYIV...T
  38 ...RCHRV..K.TVSGP.GGT.LFIVDHHHW...ARAWLEL...G.FR.RV.....PVRIL...H
  39 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AA.LR.....VHVVV...K
  40 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AA.LR.....VHVVV...K
  41 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AA.LR.....VHVVV...K
  42 3aaRDRSVlnP.VVIGP.NGDaLYVTDGHHG...LSTYYETpdgG.AA.LR.....VHVVV...K
  43 ...KSHAA..P.VVL-K.DDQ.VFLIDNHHL...CRALYEL...G.GD.YFk17imFINVV...S
  44 3daRDRTVlnP.VVIGP.NGDtLYVTDGHHG...LSTYYETpdgG.AA.LR.....VHVVV...K
  45 4naRDRSVlnP.VVIGP.NGDaLYLTDGHHG...LSTYYETpdgG.PA.LH.....VHVVV...K
  46 ...KGKPV..P.LVGNG.SGS.LWMIDRHHR...LRALLDL...D.QDaTT.....YGYLI...E
  47 4naRDRSVlnP.VVIGP.NGDaLYLTDGHHG...LSTYYETpdgG.PA.LH.....VHVVV...K
  48 4naRDRSVlnP.VVIGP.NGDaLYLTDGHHG...LSTYYETpdgG.PS.LH.....VHVVV...K
  49 ...RTRPV..P.VAVSS.AGE.HWMIDRHHR...LRALMEV...D.SSaTA.....FCSVV...L
  50 ...VKKAV..P.YVIGP.KKR.LYMTDHHHL...CRALLLA...G.HD.TV.....LVAKPrdgA
  51 1geNIDAL..PaVIIGPkDGE.LFLIDHHNI...LSTFWDMpn.G.GT.SV.....PITLK...V
  52 1geNIDAL..PsVIIGPeDGE.LFLIDHHNI...LSTFWDMpn.G.GT.SV.....PITLK...V
  53 7laDLKTV..-.-VVGY.DGR.LYLTDGHHTmtqLRELPDG...G.ASlKV.....WVRVV...E


      0          100       110        120              130         140 
     |            |         |          |                |           | 
   1 K.FSHL.GK.DEFWSVMDHRNLIYPFDAQGLRR.QS.GD.IPKNI.....HD..LEDDPFRSLAG
   2 D.LSWL.DE.TIFWRMMEHNQWVHPFGANGARH.DY.DH.LPTSL.....VG..LKDDPYRSLAG
   3 D.LSWL.DE.TIFWRMMEHNQWVHPFGANGARH.DY.DH.LPTSL.....VG..LKDDPYRSLAG
   4 D.LSWL.DE.TIFWRMMEHNQWVHPFGANGARH.DY.DH.LPTSL.....VG..LKDDPYRSLAG
   5 D.LSWL.DD.TIFWRMMEHNQWVHPFGPDGSRR.DY.AH.LPKAL.....TG..LEDDPYRSLAG
   6 D.LSWL.DD.TIFWRMMEHNQWVHPFGPDGSRR.DY.AH.LPKVL.....TG..LEDDPYRSLAG
   7 D.LSWL.DD.TIFWRMMEHNQWVHPFDADGARR.DY.AE.LPKVL.....TA..LDDDPYRSLAG
   8 D.LSWL.DE.TLFWRMMEHNQWVHPFGANGARH.DY.DH.LPTSL.....VG..LKDDPYRSLAG
   9 D.LSWL.DD.TIFWRIMEHNQWVHPFGPDGARR.EY.AH.LPQAL.....TG..LEDDPYRSLAG
  10 D.LSWL.ED.TIFWRMMEHNQWVHPFGPDGSRR.DY.AN.LPKVL.....TG..LEDDPYRSLAG
  11 D.LRMV.ER.EAFWGVMDNKRWVYPYDSKGERR.PF.RD.LPKSV.....AD..LRDDPFRSLAG
  12 D.LSWL.DE.TIFWRMMEHNQWVHPFGADGTRR.DY.GN.LPKAL.....TG..LVDDPYRSLAG
  13 D.LSMV.DR.EAFWVVLDSRRWVYPYDAKGERH.HY.RE.IPKTV.....AG..LKDDPFRSLAG
  14 D.LSAL.DK.DTFLFVLDNRGWMHPFDESGRRR.DY.SA.IPKTI.....GE..LIDDPYRSMAG
  15 D.LSMV.DR.DGFWNVMDNKRWVYPYDAKGERR.HF.KD.LPKTV.....AD..LKDDPFRSLAG
  16 D.LSMV.DR.DAFWVVLDSRRWVYPYDAKGERH.HY.KD.LPKTV.....AA..LKDDPFRSLAG
  17 D.LSSL.EK.DHFWFVMDSQRWMHPFDEKGIRR.SY.QD.IPDSL.....TE..MKDDPYRSLAG
  18 K.FSHL.GK.DEFWSVMDHRNLIYPFDAQGLRR.QS.GD.IPKNI.....HD..LEDDPFRSLAG
  19 D.LSAL.DK.DAFLIVLDNRAWMHPFDASGRRR.PY.ND.LPKSV.....DK..LVDDPFRSLAG
  20 -.IGRL.PQaSDFWEKMQENHWVWLHDARGAEI.PP.EA.LPDAL.....AG..LGDDPYRALAG
  21 -.IGRL.PQaSDFWEKMQENHWVWLHDARGAEI.PP.EA.LPDAL.....AG..LGDDPYRALAG
  22 -.IGRL.PQaSDFWEKMQENHWVWLHDARGAEI.PP.EA.LPNAL.....AG..LGDDPYRALAG
  23 D.LSQH.SL.DDFWKAMDQNLWVHPLDEHGVRH.YY.AS.IPKHL.....EK..LVDDPYRSLAG
  24 -.IGRL.PQaSDFWEKMQENHWVWLHDARGAEI.PP.EA.LPNAL.....AG..LGDDPYRALAG
  25 -.IGRL.PQaTDFWKKMQENHWVWLHDARGAEI.PP.EA.LPDAL.....AG..LGDDPYRALAG
  26 D.LSKN.SL.DDFWKAMDQNLWVHPLDEHGVRH.YY.AS.IPDHL.....EK..LVDDPYRSLAG
  27 E.VDDQ.NP.TAAITYLQTQGWLYLYDSRGQGPrHP.SE.LPRSL.....LT..LEDDPYRSLVW
  28 E.LHCS.DR.SEVLRFLEQQGWLYLIDGRGAGPrQP.ME.LPRTL.....LD..LEDDPYRSLVW
  29 D.LPTA.DR.SSVLTYLHNQGWLYLYDGRGNGP.RPaEQ.LPMSL.....LG..LDDDPYRSLVW
  30 E.LESE.SR.ESALEALQKRGWLYLFDGRGNGP.KPaTE.LPHTL.....LG..LQDDPYRSLVW
  31 -.IGRL.SQgSDFWEKMQENHWVWLHDAHGAPI.PP.AA.LPDDL.....AG..LGNDPYRALAG
  32 D.LSTS.AP.GDFWGEMDKNQWVHPLDENGVRH.CY.TL.IPSHL.....EK..LIDDPYRSLAG
  33 E.VASS.SR.AETLRELQSRGWLYLHDGRGQGPwPP.EQ.LPTSL.....LD..LQDDPYRSLVW
  34 Q.LASH.DP.SAALEALAQRGWLYLHDGRGQGPwPP.ER.LPQSL.....LS..LDDDPYRSLVW
  35 D.LSSM.KE.QAFWEWMLDNHMVHPYDEHGRRR.PL.SE.LPECI.....HA..MRDDPYRSLEA
  36 D.LSWL.DE.TIFWRMMEHNQWVHPFGANGARH.DY.DH.LPTSL.....VG..LKDDPYRSLAG
  37 E.VKTN.QV.SHMLDFLDEQGWLYLYNSRGLGP.HP.TKyLKENL.....LE..LEDDPYRSLVW
  38 D.LSGL.SP.TAFWKRMRALGFVHPYDELGQRL.GI.DA.LPATV.....MG..MRDDPYRSLAA
  39 DnLADY.SA.AAFWQQMQNRGYTRLKDGDGRPI.AP.DR.LPTGLglk..RG..MQDDRYRSLVY
  40 DnLADY.SA.AAFWQQMQNRGYTRLKDGDGRPI.AP.DR.LPAGLglk..RG..MQDDRYRSLVY
  41 DnLADY.SA.AAFWQQMQNRGYTRLKDGDGRPI.AA.DR.LPAGLglk..RG..MQDDRYRSLVY
  42 DnLADY.SA.AAFWQQMQNRGYTRLKDGDGRPI.AP.DR.LPAGLglk..RG..MQDDRYRSLVY
  43 D.LSDLkDN.SQFWNKMNSEKWVHPYNKNGEGPlDV.NE.IPKKV.....CE..LEDDVFRSIAA
  44 DnLGDY.SG.AAFWQQMQRRSYTRLKDGDGRPI.AP.DQ.LPAGLglk..LG..MQDDRYRSLVY
  45 DnLSDY.SG.DAFWQQMQSRGYLRLKNGEGKPI.TT.AQ.LPTGLglk..LG..MTNDRYRSLVY
  46 N.CPTE.DD.LESLQLLADRGWLYLYNGRGHGPlLP.QG.LPKSL.....LM..LEDDPYRSLAW
  47 DnLSDY.SG.DAFWQQMQSRGYLRLKNGEGQPI.TT.AQ.LPSGLglk..LG..MTNDRYRSLVY
  48 DnLSDY.SG.DAFWQQMQSRGYLRLKNGEGKPI.TT.AQ.LPSGLglk..LG..MTNDRYRSLVY
  49 E.LVGA.SR.AHCLEELNRRGWLYLRDGEGRGPlPP.ER.LPMDL.....GG..LEDDPFRSLVW
  50 D.WSDL.DL.PTFWHRMESQGLCWPIDVDGNRR.PC.IK.IPGHI.....SE..LTDNPWRTLAR
  51 E.YNLL.GSgDDFWPELLNDHEVWLYNNKGEKI.KP.SA.LPQYI.....GSkqLKHDKYFSLAY
  52 E.YNLL.GSgDDFWPELLNDHEVWLYNNKGKKI.KP.SA.LPQYI.....GSkqLKHDKYFSLAY
  53 N.DSNL.KTaDAFWNKMVTDGRVWLRNGQNQPI.LY.TQ.LPQNLgl8npNG..MEESQHRSLMY


               150           160        170           180          190 
                |             |          |             |            | 
   1 ALR..MAGGY.AKV..IIP..FSEFGWADFLR.RRID.R.DLLS.DS.FDD...ALAEAMKLAKS
   2 ELR..AAGGY.AKD..ATP..FSEFLWADFLR.PRIA.L.AQIR.KE.FAK...ALEAALGYAHT
   3 ELR..AAGGY.AKD..ATP..FSEFLWADFLR.PRIA.L.AQIR.KE.FAK...ALEAALGYAHT
   4 ELR..AAGGY.AKD..ATP..FSEFLWADFLR.PRIA.L.AQIR.KE.FAK...ALEAALGYAHT
   5 ELR..TAGGY.AKD..ATP..FSEFLWADYLR.QHVS.L.DQIR.KN.FAK...ALDIALHRAHE
   6 ELR..TAGGY.AKD..ATP..FSEFLWADYLR.QHVS.L.DQIR.KN.FAK...ALDIALQRAHE
   7 ELR..TAGGY.AKD..ATP..FSEFLWADYLR.QHVS.V.DQIR.KS.FSK...ALDAALRRAHD
   8 ELR..TAGGY.AKD..AMP..FSEFLWADFLR.TKIA.L.TQIR.KE.FAK...ALEAALGYAHT
   9 ELR..TAGGY.AKD..ATP..FSEFLWADYLR.QHVS.L.DQIR.KN.FDK...ALDLSLRRAHD
  10 ELR..TAGGY.AKD..ATP..FSEFLWADYLR.QHVT.L.DQIR.KN.FSK...ALDLSLRRAHD
  11 ELR..RLGGF.AKD..TTP..FSEFLWADYLR.RKLS.R.KAVD.AN.FDK...ALEKALSAAKS
  12 ELR..TAGGY.AKD..ATP..FSEFLWADYLR.QHVS.L.DQIR.KN.FAK...ALDIALHRAHE
  13 ELR..RVGGY.AKD..TTP..FSEFLWADFLR.RRLS.R.KSVT.AN.FQN...AAEKALALAKS
  14 ELR..RMGGF.AKD..TTP..FSEFIWADFLR.RRID.R.NAVA.KN.FDK...AMKEALSLAKG
  15 ELR..RAGGF.AKD..TTP..FSEFLWADFLR.RRVK.R.KTVE.SH.FAA...AMEHALALAKS
  16 ELR..RIGGY.AKD..TTP..FSEFLWADFLR.RRLS.R.KSVD.AD.FAK...ATELSLALAKS
  17 SLR..RAGGY.AKD..VTP..FSEFLWADYLR.RQFN.G.ADIA.HN.FND...FLEKALILAHD
  18 ALR..MAGGY.AKV..IIP..FSEFGWADFLR.RRID.R.DLLS.DS.FDD...ALAEAMKLAKS
  19 EVR..RLGGY.AKD..TTP..FAEFLWADFFR.RRMD.A.RGLE.DD.FHK...AATHALRLARQ
  20 YAE..DENAF.DKD..RQSy.FIEFHWARYFG.ERMHwR.PISR.AT.LPD...DLKQALRLACE
  21 YAE..DENAF.DKD..RQSy.FIEFHWARYFG.ERMHwR.PISR.AT.LPD...DLKQALRLACE
  22 YAE..DENAF.DKD..RQSy.FIEFHWARYFG.ERMHwR.PISR.AT.LPD...DLKQALHLACE
  23 YVR..DAGGY.DKT..PTA..FAEFVWADFFR.RSIP.I.EDLL.AD.FQA...AVHAALPLAKS
  24 YAE..DENAF.DKD..RQSy.FIEFHWARYFG.ERMHwR.PISR.AT.LPD...DLKQALHLACE
  25 YAE..DENAF.DKD..RQSy.FIEFHWARYFG.ERMHwR.PISR.AT.LPD...DLKQALRLACE
  26 YVR..NAGGY.DKT..PTA..FAEFVWADFFR.RSIP.I.EDLL.AD.FQA...AVRAALPLAKS
  27 KLK..QEGLIkPQA..HIP..YHEFRWAAWLR.QRPL.P.PFSS.RQ.LEP...ALAPARRLVCS
  28 KLK..KEGFIkPQP..QIP..YHEFRWGAWLR.RRPL.P.PFSS.RQ.LQP...ALAPARRLVCS
  29 KLK..QEGWIkPQP..LIP..YHEFRWGAWLR.SRPL.P.PFSS.RR.LEP...ALAAARQLVCS
  30 KLK..KEGLIkPQP..LIP..YHEFRWGSWLR.TRPL.P.PFSS.AR.LEP...ALPAARCLARS
  31 YAE..DENAF.DKD..RRSy.FIEFHWARYFG.ERMHwR.PISR.AS.LPG...DLEEALRLACE
  32 YVR..DAGGY.QKT..PTA..FAEFVWADFFR.RHIA.V.EDLK.AD.FQA...AVKCAKVLAAS
  33 KLK..KEGVLrPQP..LIP..YHEFRWGAWLR.RRPL.P.PFHS.GC.LEP...ALPTARRLARS
  34 KLK..QEKVIsPAP..LIP..FHEFRWGAWLR.SRCL.P.PFSS.LC.LEP...ALPAARALARS
  35 FVQ..LAGGY.RKV..KQA..YPDFKWADFFR.RHVE.G.PLDS.PEmFAA...ALVRAFQLAQS
  36 ELR..AAGGY.AKD..ATP..FSEFLWADFLR.PRIA.L.AQIR.KE.FAK...ALEAALGYAHT
  37 KLK..QEGIIkAKP..LIP..YHEFRWAAWLR.KRPL.P.PFNS.RN.LTP...ALTKARKFTTS
  38 FAR..QSGAY.RKP..PDA..YGDFRWAGFLR.ERIE.E.DMGTiGG.FAL...ALSQAIRLARG
  39 FTR..DIG-Y.AKP..AQAtdYLEFYWADWLR.QQPHaF.PLAG.YD.LTR...AGATDPDPATA
  40 FTR..DIG-Y.AKP..TQAtdYLEFYWADWLR.QQPQaF.PLAG.YD.LTR...AGATDPDPATA
  41 FTR..DIG-Y.AKP..AQAtdYLEFYWADWLRqQRQA.F.PLAG.YD.LTR...AGATDPDPATA
  42 FTR..DIG-Y.AKP..AQAtdYLEFYWADWLR.QQPQaF.PLAG.YD.LTR...AGATDPDPATA
  43 VVK..IKGGF.KKS..FIP..YAEFQWANYFR.SCFE.N.KKVDdNN.FDK...VIDESLELAKN
  44 FTR..DIG-Y.AKP..AQAtdYLEFYWADWLR.QQPEtF.SLAG.YD.LAR...AGATDPDPANA
  45 FTR..DIG-Y.SKP..AQAtdYLEFYWADWLR.AQPGtF.ALTG.YD.LTR...AGTTDPDPAKA
  46 KLK..SEGLIrPEP..LIP..YHEFRWGTWLR.SRAL.P.PFSS.KY.LEP...ALPAARSLVRS
  47 FTR..DIG-Y.SKP..AQAtdYLEFYWADWLRaQPCT.F.ALAN.YD.LTR...GGTTDPDPAKA
  48 FTR..DIG-Y.SKP..AQAtdYLEFYWADWLR.AQPGtF.ALAN.YD.LTR...GGTTDPDPAKA
  49 KLK..QEGLIrAQP..QVP..FLEFHWGSWLR.HQNL.P.AFGS.MD.LSP...ALPEARRLVRG
  50 GVR..-GDAY.SNL..DTP..FQEFMWGNYYR.SFMT.T.RLLQ.SD.IEL...AEKLAVKLSRL
  51 FLDgiAYDMP.DEN..KVP..YVKLNWSRVLR.EKMD.IgDYNL.NN.LDEyatALTEAATIITD
  52 FLNgiAYDMP.DEN..KVP..YVKLNWSRVLR.EKMD.IgDYNL.NN.LDEyatALTSAATIITD
  53 FLR..DIG-Y.SKPekATD..FLEFLWQDWFE.NQAK.L.GLV-.KP.LS-...-----------


             200         
              |         
   1 REARHLPG.WCGVE....E
   2 QEARYLPG.WSGVIaap.R
   3 QEARYLPG.WSGVIaap.R
   4 QEARYLPG.WSGVIaap.R
   5 QDARYLPG.WSGVIavk.P
   6 QDARYLPG.WSGVIavk.P
   7 QDARYLPG.WSGVVavk.P
   8 QEARYLPG.WSGVIaap.R
   9 QDARYLPG.WSGVIavk.P
  10 QDARYLPG.WSGVIaak.P
  11 KDAIYLPG.WCGPAdd..D
  12 QDARYLPG.WSGVIavk.P
  13 KDAIYLPG.WCGPAad..D
  14 KDADYLPG.WCGPTs...D
  15 HDAVYLPG.WCGPAsd..D
  16 RDAIYLPG.WCGPAfd..D
  17 KKASYLPG.WCAPQvkhv-
  18 REARHLPG.WCGVE....E
  19 KSAGYLPG.WSGPD....N
  20 PAARELPG.YRQDCph..G
  21 PAARELPG.YRQDCp...H
  22 PAARELPG.YRQDCp...H
  23 KFAKALPG.YNGK-....-
  24 PAARELPG.YRQDCp...H
  25 PAAKELPG.YRQDCp...R
  26 KFAHALPG.YNGK-....-
  27 ESARNMAG.WKGEKqpd.S
  28 QAASTMAG.WKGDKkac.R
  29 AAAQDMPG.WKGDKkac.R
  30 AAARHLAG.WRGGA....D
  31 PAAKELPG.YRQDCp...R
  32 KWASGLPG.FQAK-....-
  33 PAALHLAG.WKEEA....-
  34 AAGSRLAG.WRG--....-
  35 PKARGLPG.FIEKPptc.-
  36 QEARYLPG.WSGVIaap.R
  37 QAASSLAG.WTGDKi...-
  38 SAARRLPG.YCGGAa...S
  39 DTG-YLNAvWNASArmva-
  40 DTG-YLNAvWNASArmva-
  41 DTG-YLNAvWNASArmva-
  42 DTG-YLNAvWNASArmva-
  43 EEAKKLPG.YIDN-....-
  44 DTG-YLNAvWNASArmva-
  45 DTG-YLNAvWNASTrmva-
  46 NAASHLDG.WIG--....-
  47 DTG-YLNAvWNASTrmva-
  48 DTG-YLNAvWNASTrmva-
  49 QVG--LGG.PPA--....-
  50 DEAQDLPG.YLGPK....-
  51 LESDTVIG.KSEKIakem-
  52 LKSDTVIG.RSSKTakem-
  53 --------.-----....-