Best Alignments for T0345

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2f8aA/T0345-2f8aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f8aA/T0345-2f8aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5890e-321.85e-118
1gp1A/T0345-1gp1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gp1A/T0345-1gp1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8245e-312.00e-118 1gp1A c.47.1.10
2f9sA/T0345-2f9sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2f9sA/T0345-2f9sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7482e-151.11e-58
1xzoA/T0345-1xzoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xzoA/T0345-1xzoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4008e-122.50e-56
2gs3A/T0345-2gs3A-t2k-global-adpstyle1.a2m 2gs3A/T0345-2gs3A-t2k-global-adpstyle1.al 5.2283e-111.33e-64
1z5yE/T0345-1z5yE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z5yE/T0345-1z5yE-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6804e-092.57e-41
2cvbA/T0345-2cvbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cvbA/T0345-2cvbA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9025e-091.81e-39
1zzoA/T0345-1zzoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zzoA/T0345-1zzoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7261e-081.44e-41
2fy6A/T0345-2fy6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fy6A/T0345-2fy6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7352e-081.86e-38
1xvwA/T0345-1xvwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xvwA/T0345-1xvwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3702e-072.17e-41

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001