CreatePredAlphaCost pred_alpha2k alpha11 T0339.t2k.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha04 alpha11 T0339.t04.alpha.rdb 2 alpha alpha_prev sum CreatePredAlphaCost pred_alpha06 alpha11 T0339.t06.alpha.rdb 2 alpha alpha_prev sum SetCost wet6.5 15 near_backbone 5 way_back 5 dry5 15 dry6.5 20 dry8 15 dry12 5 \ phobic_fit 2 \ sidechain 5 \ n_ca_c 5 bad_peptide 10 \ bystroff 5 \ soft_clashes 20 backbone_clashes 2 \ break 50 \ pred_alpha2k 2 \ pred_alpha04 2 \ pred_alpha06 2 \ constraints 10 \ hbond_geom 5 \ hbond_geom_backbone 10 \ hbond_geom_beta 50 \ hbond_geom_beta_pair 100 \ missing_atoms 1 #sheet constraints from conformation 0 T0339-1eg5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m:1eg5A SheetConstraint (T0339)D64 (T0339)S69 (T0339)I242 (T0339)I237 hbond (T0339)I66 1 SheetConstraint (T0339)P108 (T0339)S113 (T0339)A133 (T0339)V138 hbond (T0339)F110 1 SheetConstraint (T0339)F110 (T0339)T112 (T0339)L162 (T0339)T164 hbond (T0339)I111 1 SheetConstraint (T0339)R161 (T0339)L167 (T0339)I200 (T0339)A206 hbond (T0339)V163 1 SheetConstraint (T0339)V202 (T0339)D205 (T0339)D223 (T0339)T226 hbond (T0339)T204 1 SheetConstraint (T0339)D223 (T0339)H230 (T0339)R243 (T0339)R236 hbond (T0339)L225 1 SheetConstraint (T0339)G311 (T0339)R314 (T0339)I335 (T0339)N332 hbond (T0339)Q312 1 SheetConstraint (T0339)N329 (T0339)S334 (T0339)V390 (T0339)A385 hbond (T0339)C331 1 SheetConstraint (T0339)L352 (T0339)A354 (T0339)V4 (T0339)M6 hbond (T0339)M353 1 #sheet constraints from conformation 1 T0339-1p3wA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m:1p3wA SheetConstraint (T0339)K3 (T0339)M6 (T0339)V351 (T0339)A354 hbond (T0339)V4 1 SheetConstraint (T0339)D64 (T0339)S69 (T0339)I242 (T0339)I237 hbond (T0339)I66 1 SheetConstraint (T0339)P108 (T0339)S113 (T0339)A133 (T0339)V138 hbond (T0339)F110 1 SheetConstraint (T0339)F110 (T0339)T112 (T0339)L162 (T0339)T164 hbond (T0339)I111 1 SheetConstraint (T0339)R161 (T0339)L167 (T0339)I200 (T0339)A206 hbond (T0339)V163 1 SheetConstraint (T0339)V202 (T0339)D205 (T0339)D223 (T0339)T226 hbond (T0339)T204 1 SheetConstraint (T0339)D223 (T0339)H230 (T0339)R243 (T0339)R236 hbond (T0339)L225 1 SheetConstraint (T0339)G311 (T0339)I315 (T0339)R336 (T0339)N332 hbond (T0339)K313 1 SheetConstraint (T0339)N329 (T0339)I335 (T0339)V390 (T0339)N384 hbond (T0339)C331 1 SheetConstraint (T0339)L386 (T0339)R387 (T0339)V356 (T0339)S355 hbond (T0339)R387 1