Best Alignments for T0338

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cchB/T0338-2cchB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cchB/T0338-2cchB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3810e-283.30e-98
1vin/T0338-1vin-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vin/T0338-1vin-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.1850e-281.81e-96 1vin a.74.1.1
a.74.1.1
1w98B/T0338-1w98B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w98B/T0338-1w98B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1972e-239.62e-82
1kxu/T0338-1kxu-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kxu/T0338-1kxu-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6416e-223.92e-72 1jkw a.74.1.1
a.74.1.1
1f5qB/T0338-1f5qB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f5qB/T0338-1f5qB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2894e-171.59e-69 1f5qB a.74.1.1
a.74.1.1
1aisB/T0338-1aisB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1aisB/T0338-1aisB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7780e-174.62e-67 1aisB a.74.1.2
a.74.1.2
1bu2A/T0338-1bu2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1bu2A/T0338-1bu2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0400e-141.27e-82 1bu2A a.74.1.1
a.74.1.1
1c9bA/T0338-1c9bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1c9bA/T0338-1c9bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1400e-141.72e-67 1tfb a.74.1.2
a.74.1.2
2g9xB/T0338-2g9xB-t04-global-adpstyle1.a2m 2g9xB/T0338-2g9xB-t04-global-adpstyle1.al 6.0469e-131.22e-69
2c5nB/T0338-2c5nB-t04-global-adpstyle1.a2m 2c5nB/T0338-2c5nB-t04-global-adpstyle1.al 8.4560e-131.22e-69

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001