Best Alignments for T0333

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1f0kA/T0333-1f0kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1f0kA/T0333-1f0kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7321e-287.92e-119 1f0kA c.87.1.2
2acvA/T0333-2acvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2acvA/T0333-2acvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6305e-261.08e-114
2c1xA/T0333-2c1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1xA/T0333-2c1xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1380e-243.95e-113
1iirA/T0333-1iirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1iirA/T0333-1iirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7053e-222.15e-118 1iirA c.87.1.5
1rzuA/T0333-1rzuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rzuA/T0333-1rzuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4213e-192.84e-98 c.87.1.8
1v4vA/T0333-1v4vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v4vA/T0333-1v4vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7420e-198.77e-99 c.87.1.3
2bfwA/T0333-2bfwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bfwA/T0333-2bfwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3222e-149.46e-51
1xv5A/T0333-1xv5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xv5A/T0333-1xv5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0049e-096.41e-68
1pswA/T0333-1pswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1pswA/T0333-1pswA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8106e-077.90e-54 c.87.1.7
1uqtA/T0333-1uqtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1uqtA/T0333-1uqtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2613e-076.51e-54 c.87.1.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001