Best Alignments for T0332

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gz0A/T0332-1gz0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gz0A/T0332-1gz0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8887e-198.87e-90 c.116.1.1
d.79.3.3
1v2xA/T0332-1v2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v2xA/T0332-1v2xA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.0622e-192.38e-83 c.116.1.1
1zjrA/T0332-1zjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjrA/T0332-1zjrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9118e-182.21e-82
1x7oA/T0332-1x7oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x7oA/T0332-1x7oA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8379e-183.25e-79
1z85A/T0332-1z85A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z85A/T0332-1z85A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4072e-021.98e-26
1v6zA/T0332-1v6zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6zA/T0332-1v6zA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6284e-023.10e-22
1nxzA/T0332-1nxzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nxzA/T0332-1nxzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6229e-017.64e-22 b.122.1.2
c.116.1.5
1o6dA/T0332-1o6dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o6dA/T0332-1o6dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1411e-013.15e-12 c.116.1.3
2as0A/T0332-2as0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2as0A/T0332-2as0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9674e-011.65e-16
1qwgA/T0332-1qwgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwgA/T0332-1qwgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9445e-015.76e-17 c.1.27.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001