Best Alignments for T0332

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v2xA/T0332-1v2xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v2xA/T0332-1v2xA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4109e-212.71e-81 c.116.1.1
1x7oA/T0332-1x7oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x7oA/T0332-1x7oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.2854e-211.45e-77
1zjrA/T0332-1zjrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjrA/T0332-1zjrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2123e-201.51e-79
1z85A/T0332-1z85A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z85A/T0332-1z85A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2162e-043.97e-28
1o6dA/T0332-1o6dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o6dA/T0332-1o6dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.6892e-031.92e-14 c.116.1.3
1v6zA/T0332-1v6zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6zA/T0332-1v6zA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3671e-022.11e-25
1k3rA/T0332-1k3rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k3rA/T0332-1k3rA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.1831e-025.73e-18 b.40.4.10
c.116.1.2
1vhyA/T0332-1vhyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vhyA/T0332-1vhyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3823e-022.53e-22 b.122.1.2
c.116.1.5
1d2nA/T0332-1d2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d2nA/T0332-1d2nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5659e-021.49e-21 1d2nA c.37.1.20
1h1yA/T0332-1h1yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1h1yA/T0332-1h1yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3005e-019.52e-13 c.1.2.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001