Best Alignments for T0332

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gz0A/T0332-1gz0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gz0A/T0332-1gz0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9200e-204.86e-86 c.116.1.1
d.79.3.3
1v2xA/T0332-1v2xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v2xA/T0332-1v2xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4628e-188.26e-80 c.116.1.1
1x7oA/T0332-1x7oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x7oA/T0332-1x7oA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0597e-171.68e-79
1zjrA/T0332-1zjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zjrA/T0332-1zjrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4667e-172.49e-81
1z85A/T0332-1z85A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z85A/T0332-1z85A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.4486e-031.43e-27
1nxzA/T0332-1nxzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1nxzA/T0332-1nxzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.8241e-023.27e-24 b.122.1.2
c.116.1.5
1v6zA/T0332-1v6zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6zA/T0332-1v6zA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.4590e-026.51e-23
1o6dA/T0332-1o6dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o6dA/T0332-1o6dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.6481e-024.48e-13 c.116.1.3
1k3rA/T0332-1k3rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k3rA/T0332-1k3rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9532e-018.77e-16 b.40.4.10
c.116.1.2
1d2nA/T0332-1d2nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1d2nA/T0332-1d2nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9715e-011.78e-21 1d2nA c.37.1.20

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001