PFRMAT RR
TARGET T0332
AUTHOR 5370-1100-4902
REMARK From group SAM-TO6 under the direction of
REMARK Kevin Karplus.
REMARK Residue-residue contact predictions
REMARK  by George Shackelford and Kevin Karplus
REMARK The value given is an approximation of the probability
REMARK as provided by the neural network.
REMARK The predictions are limited to a score >= .18 which
REMARK is an approximation of the probability.
REMARK
METHOD The predictor is an artificial neural network.
METHOD NN: con.aa5str2_5near5nsep5.entmi_epplcc.th62.47.net
METHOD Inputs may include separation and sequence length,
METHOD e-value statistic based on mutual information values,
METHOD a statistic based on propensity of residues in contact.
METHOD Other inputs are distributions from alignments and
METHOD secondary predictions from SAM-t04 and/or SAM-t06 of
METHOD the University of California, Santa Cruz
MODEL 1
LGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQ
HLSVSAEQWLPLVEVKPPQLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYC
FPEKSLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIW
EYTRQQLLS
5 15 0 8 0.0296423381566
5 16 0 8 0.0216163464802
6 35 0 8 0.0463822710886
7 16 0 8 0.0371866219945
7 17 0 8 0.0288394917591
7 35 0 8 0.187631188658
7 36 0 8 0.116965741767
7 37 0 8 0.0333464268072
7 39 0 8 0.02130441398
7 82 0 8 0.15894179144
7 83 0 8 0.157266158622
7 104 0 8 0.0901500865465
7 105 0 8 0.0849878622833
8 23 0 8 0.0320825618058
8 24 0 8 0.0263369401644
8 25 0 8 0.023734715905
8 28 0 8 0.0651655587051
8 29 0 8 0.0448390363602
8 30 0 8 0.099914038986
8 31 0 8 0.0849582597621
8 33 0 8 0.302018073885
8 36 0 8 0.238092426917
8 37 0 8 0.0665074312292
8 38 0 8 0.0319947626799
8 52 0 8 0.0275383470992
8 59 0 8 0.0302785971796
8 60 0 8 0.0610638203639
8 62 0 8 0.0727125750834
8 63 0 8 0.0489687507104
8 77 0 8 0.0518528820556
8 81 0 8 0.0392792925274
8 82 0 8 0.228918573086
8 84 0 8 0.167911030043
8 85 0 8 0.0794134798411
8 86 0 8 0.0251607441678
8 104 0 8 0.0949476467857
8 105 0 8 0.228012280516
8 106 0 8 0.168400284898
8 107 0 8 0.118729856845
8 108 0 8 0.024102307651
8 124 0 8 0.0834007117268
8 127 0 8 0.0948982008163
8 128 0 8 0.0577037715634
9 21 0 8 0.0386849649876
9 23 0 8 0.0241466463722
9 24 0 8 0.0289315848771
9 25 0 8 0.0388023991648
9 27 0 8 0.0526905358131
9 28 0 8 0.0686020535767
9 29 0 8 0.0677966047597
9 30 0 8 0.108802277284
9 31 0 8 0.122594775017
9 33 0 8 0.406023708861
9 35 0 8 0.808137917675
9 36 0 8 0.885760528672
9 37 0 8 0.158690657964
9 38 0 8 0.0343509607113
9 39 0 8 0.0293997601345
9 41 0 8 0.0216281549584
9 43 0 8 0.031819945154
9 52 0 8 0.0586637390346
9 53 0 8 0.0740147607111
9 55 0 8 0.0359833283056
9 56 0 8 0.0735531565628
9 59 0 8 0.0366989936518
9 60 0 8 0.0802462540621
9 61 0 8 0.0408511538696
9 62 0 8 0.0958568670778
9 63 0 8 0.0925173123304
9 65 0 8 0.0367598252062
9 77 0 8 0.146557202624
9 78 0 8 0.0298855342534
9 81 0 8 0.0362666667222
9 82 0 8 0.312539077013
9 84 0 8 0.227518471427
9 85 0 8 0.14861148747
9 86 0 8 0.0514088442385
9 104 0 8 0.141645135929
9 105 0 8 0.239365985931
9 106 0 8 0.25759007867
9 107 0 8 0.142867622461
9 108 0 8 0.0462300295513
9 124 0 8 0.144392965556
9 125 0 8 0.090976354719
9 128 0 8 0.0739207483088
10 20 0 8 0.0288688990988
10 21 0 8 0.10466410507
10 22 0 8 0.0262857050316
10 24 0 8 0.142231330908
10 25 0 8 0.0970741487712
10 27 0 8 0.102388614572
10 28 0 8 0.153824784214
10 30 0 8 0.0553075938633
10 31 0 8 0.0954684559762
10 32 0 8 0.0319037755902
10 33 0 8 0.272469337094
10 36 0 8 0.743304436606
10 37 0 8 0.179007746538
10 38 0 8 0.0806733761528
10 52 0 8 0.0343229847024
10 53 0 8 0.0345614313836
10 56 0 8 0.0268159805229
10 59 0 8 0.0217368385003
10 60 0 8 0.049566005972
10 62 0 8 0.0461434991049
10 63 0 8 0.0443068415846
10 70 0 8 0.0207169503215
10 74 0 8 0.0336922232904
10 77 0 8 0.0585570398376
10 82 0 8 0.158698790525
10 84 0 8 0.206716031627
10 85 0 8 0.155873538919
10 86 0 8 0.081245257825
10 87 0 8 0.0299600610401
10 105 0 8 0.120294561534
10 106 0 8 0.221119122022
10 107 0 8 0.236053756588
10 108 0 8 0.112574809566
10 109 0 8 0.04735297354
10 124 0 8 0.0535041171908
10 127 0 8 0.065261522922
10 128 0 8 0.0980725019292
10 130 0 8 0.0216964034082
10 141 0 8 0.0215338497839
10 144 0 8 0.0438797194939
10 145 0 8 0.066757588798
10 146 0 8 0.022926046594
10 147 0 8 0.0373053573815
10 148 0 8 0.040933130082
10 149 0 8 0.0259061746864
11 20 0 8 0.0504921419905
11 21 0 8 0.0921737929642
11 22 0 8 0.0453731829505
11 24 0 8 0.114349984927
11 25 0 8 0.0924454204933
11 26 0 8 0.0214409108796
11 27 0 8 0.071164786121
11 28 0 8 0.0829137339889
11 29 0 8 0.0255235214379
11 30 0 8 0.0567642981453
11 31 0 8 0.0601711904957
11 33 0 8 0.132449486835
11 36 0 8 0.689980083111
11 37 0 8 0.242565660634
11 38 0 8 0.141788919603
11 39 0 8 0.0267319549052
11 52 0 8 0.0549113755034
11 53 0 8 0.0250394388917
11 56 0 8 0.0764805531313
11 60 0 8 0.0322136912153
11 62 0 8 0.0330793535121
11 63 0 8 0.0363092813406
11 65 0 8 0.023141169091
11 74 0 8 0.0332947037208
11 77 0 8 0.0274059815404
11 82 0 8 0.0699989022115
11 84 0 8 0.125553400619
11 85 0 8 0.1565670837
11 86 0 8 0.112137603099
11 87 0 8 0.045000711668
11 105 0 8 0.0454958219666
11 106 0 8 0.214119589634
11 107 0 8 0.208138904456
11 108 0 8 0.122287364221
11 109 0 8 0.0500263089106
11 110 0 8 0.0231617282046
11 127 0 8 0.0334209210637
11 128 0 8 0.0743016774545
11 130 0 8 0.031481012552
11 145 0 8 0.0238459368059
11 147 0 8 0.023279975638
12 21 0 8 0.172723554194
12 22 0 8 0.172886530711
12 23 0 8 0.179188614689
12 24 0 8 0.174651296394
12 25 0 8 0.117970926276
12 26 0 8 0.0438888279619
12 27 0 8 0.105819904604
12 28 0 8 0.111683480907
12 30 0 8 0.0322054610639
12 31 0 8 0.0482869168169
12 33 0 8 0.0866960253437
12 36 0 8 0.266933103397
12 37 0 8 0.25008827933
12 38 0 8 0.213235742931
12 39 0 8 0.0674413745061
12 49 0 8 0.0332367998883
12 52 0 8 0.0386430009741
12 53 0 8 0.0311860283084
12 56 0 8 0.0317592762507
12 60 0 8 0.0415808072203
12 62 0 8 0.0395349802374
12 63 0 8 0.0306219213644
12 65 0 8 0.0426152689481
12 70 0 8 0.0210927722189
12 74 0 8 0.0348997459109
12 77 0 8 0.0259389326411
12 82 0 8 0.0301015350669
12 84 0 8 0.10549004794
12 85 0 8 0.143564420267
12 86 0 8 0.141055687926
12 87 0 8 0.0886637797434
12 105 0 8 0.0216795527424
12 106 0 8 0.060204696646
12 107 0 8 0.167623462694
12 108 0 8 0.166535326066
12 109 0 8 0.10304702669
12 110 0 8 0.0628985260697
12 127 0 8 0.0249547301389
12 128 0 8 0.0741471588002
12 130 0 8 0.054008010655
12 140 0 8 0.0227086144497
12 142 0 8 0.0374371048657
12 144 0 8 0.0247966982183
12 147 0 8 0.0280809840829
12 148 0 8 0.0217191420481
13 22 0 8 0.0877978246745
13 23 0 8 0.139099319111
13 24 0 8 0.0670292163271
13 25 0 8 0.0943705602747
13 27 0 8 0.0737206873143
13 28 0 8 0.0563625496441
13 30 0 8 0.0371908509261
13 31 0 8 0.0286594368641
13 33 0 8 0.0373294297614
13 35 0 8 0.0610787842757
13 36 0 8 0.218735305814
13 37 0 8 0.150837206696
13 39 0 8 0.189881956172
13 40 0 8 0.065307715867
13 41 0 8 0.0564698994461
13 43 0 8 0.0404363932712
13 49 0 8 0.0357657009799
13 52 0 8 0.0362774017024
13 55 0 8 0.0251926563362
13 56 0 8 0.0244290088816
13 62 0 8 0.0311888584396
13 63 0 8 0.0265894399106
13 65 0 8 0.052198027934
13 82 0 8 0.0210601769155
13 84 0 8 0.0264682647554
13 85 0 8 0.0431315239046
13 86 0 8 0.0722034767803
13 87 0 8 0.0590417404584
13 108 0 8 0.0305519162814
13 109 0 8 0.0679830030522
13 110 0 8 0.0345532988229
13 111 0 8 0.063820758459
13 129 0 8 0.0233592193099
14 23 0 8 0.0601048288
14 27 0 8 0.0209908874978
14 35 0 8 0.0209744597251
14 36 0 8 0.0437554539656
14 39 0 8 0.148836596751
14 40 0 8 0.0865724104203
14 41 0 8 0.0510526380776
14 43 0 8 0.0332699807361
14 49 0 8 0.0257650910225
14 56 0 8 0.0230224662343
14 109 0 8 0.0344866118247
14 110 0 8 0.0356778693237
14 111 0 8 0.0755693810246
14 112 0 8 0.0243930304328
14 129 0 8 0.0325024296523
15 24 0 8 0.154783450476
15 25 0 8 0.134459530551
15 26 0 8 0.0324505113845
15 27 0 8 0.126966839678
15 28 0 8 0.0861147099011
15 29 0 8 0.0617180035509
15 30 0 8 0.084393209441
15 31 0 8 0.0707793027413
15 32 0 8 0.0214551916563
15 33 0 8 0.0379793840167
15 35 0 8 0.057012178597
15 36 0 8 0.175959988071
15 37 0 8 0.106585991827
15 38 0 8 0.0952397683679
15 39 0 8 0.186739859999
15 40 0 8 0.0863482770459
15 41 0 8 0.119539209292
15 42 0 8 0.043881346006
15 43 0 8 0.113633994278
15 44 0 8 0.0322118369915
15 46 0 8 0.0284217709086
15 48 0 8 0.0840981601369
15 49 0 8 0.118625760068
15 50 0 8 0.0244161919658
15 52 0 8 0.0879110299201
15 53 0 8 0.0340132967889
15 55 0 8 0.0754054285998
15 56 0 8 0.065233546913
15 59 0 8 0.0411068415797
15 60 0 8 0.038145288256
15 62 0 8 0.042445786382
15 63 0 8 0.0268025780628
15 65 0 8 0.0559520179773
15 70 0 8 0.0325565925069
15 73 0 8 0.0313035275462
15 77 0 8 0.0212592945329
15 86 0 8 0.0311582800111
15 87 0 8 0.0321756958915
15 109 0 8 0.067529856767
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15 111 0 8 0.103217159861
15 112 0 8 0.0306799878481
15 120 0 8 0.02405800146
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15 132 0 8 0.0206790525883
15 137 0 8 0.0518837857865
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15 140 0 8 0.0418478805155
15 141 0 8 0.0643288808549
15 145 0 8 0.0487293281218
16 37 0 8 0.0220832855884
16 39 0 8 0.0863108672665
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16 41 0 8 0.0810588595325
16 42 0 8 0.0787716581465
16 43 0 8 0.0774434483244
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16 45 0 8 0.0337579343813
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16 48 0 8 0.0332289926299
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16 65 0 8 0.0232391176528
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16 113 0 8 0.0318443753665
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17 27 0 8 0.0429353665393
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17 30 0 8 0.0293650503652
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17 51 0 8 0.0242261502862
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18 48 0 8 0.0364797398139
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19 48 0 8 0.0270298668707
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21 48 0 8 0.0383629155818
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END