Best Alignments for T0331

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fhqA/T0331-2fhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0331-2fhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2154e-091.13e-46
1dnlA/T0331-1dnlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1dnlA/T0331-1dnlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6078e-091.69e-42 1ci0A b.45.1.1
1rfeA/T0331-1rfeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0331-1rfeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7008e-099.07e-39
1ty9A/T0331-1ty9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0331-1ty9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3607e-082.11e-40
2fg9A/T0331-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0331-2fg9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6702e-062.78e-33
2aq6A/T0331-2aq6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0331-2aq6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1957e-053.34e-25
2furA/T0331-2furA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2furA/T0331-2furA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6002e-052.18e-31
2asfA/T0331-2asfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2asfA/T0331-2asfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9868e-052.30e-30
1w9aA/T0331-1w9aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9aA/T0331-1w9aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1580e-043.66e-21
1xhnA/T0331-1xhnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xhnA/T0331-1xhnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0423e-041.02e-29

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001