Best Alignments for T0331

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1g79A/T0331-1g79A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1g79A/T0331-1g79A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8580e-069.85e-24 1ci0A b.45.1.1
1t9mA/T0331-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t9mA/T0331-1t9mA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5587e-062.92e-23
2fhqA/T0331-2fhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fhqA/T0331-2fhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4163e-063.06e-22
1ty9A/T0331-1ty9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ty9A/T0331-1ty9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6472e-051.53e-21
1rfeA/T0331-1rfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rfeA/T0331-1rfeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9178e-056.92e-21
2aq6A/T0331-2aq6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2aq6A/T0331-2aq6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5327e-044.15e-15
1xxoA/T0331-1xxoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xxoA/T0331-1xxoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0747e-031.07e-14
1w9aA/T0331-1w9aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w9aA/T0331-1w9aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3227e-036.75e-15
2furA/T0331-2furA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2furA/T0331-2furA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8955e-031.37e-14
2fg9A/T0331-2fg9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fg9A/T0331-2fg9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.7520e-033.37e-14

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001