Best Alignments for T0329

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ah5A/T0329-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0329-2ah5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.9315e-224.43e-103
2gfhA/T0329-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0329-2gfhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.1119e-205.34e-95
1te2A/T0329-1te2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0329-1te2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.7895e-207.54e-96 c.108.1.6
2fdrA/T0329-2fdrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0329-2fdrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2043e-204.21e-94
2go7A/T0329-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0329-2go7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2564e-191.47e-87
1rqlA/T0329-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1rqlA/T0329-1rqlA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2027e-194.29e-93 c.108.1.3
1swvA/T0329-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0329-1swvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.2867e-191.64e-88
1x42A/T0329-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0329-1x42A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9237e-193.43e-83
1jud/T0329-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0329-1jud-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4789e-182.65e-81 1qq5A c.108.1.1
2fi1A/T0329-2fi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi1A/T0329-2fi1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2989e-174.42e-79

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001