Best Alignments for T0326

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2ghrA/T0326-2ghrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ghrA/T0326-2ghrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.8037e-471.74e-177
1wl8A/T0326-1wl8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wl8A/T0326-1wl8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1445e-165.42e-62
1gpmA/T0326-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0326-1gpmA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8786e-151.45e-56 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1o1yA/T0326-1o1yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o1yA/T0326-1o1yA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3278e-111.16e-50 c.23.16.1
1cs0B/T0326-1cs0B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1cs0B/T0326-1cs0B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4573e-082.52e-41 1c3oB c.8.3.1
c.23.16.1
2a9vA/T0326-2a9vA-t2k-global-adpstyle1.a2m 2a9vA/T0326-2a9vA-t2k-global-adpstyle1.al 1.4699e-051.04e-32
1vcoA/T0326-1vcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vcoA/T0326-1vcoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9504e-041.87e-27 c.23.16.1
c.37.1.10
2abwA/T0326-2abwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2abwA/T0326-2abwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.0471e-034.48e-23
1ox6A/T0326-1ox6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ox6A/T0326-1ox6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.1201e-031.27e-23 c.1.2.1
c.23.16.1
1t0bA/T0326-1t0bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1t0bA/T0326-1t0bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.6692e-021.17e-27 c.23.16.6

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001