Best Alignments for T0325

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v6tA/T0325-1v6tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6tA/T0325-1v6tA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5072e-041.80e-38
1ny1A/T0325-1ny1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ny1A/T0325-1ny1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0682e-036.67e-34 c.6.2.3
2c71A/T0325-2c71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c71A/T0325-2c71A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.9050e-038.37e-37
1mi3A/T0325-1mi3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1mi3A/T0325-1mi3A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2526e-028.49e-20 c.1.7.1
1xw8A/T0325-1xw8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xw8A/T0325-1xw8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9380e-026.78e-26
2cc0A/T0325-2cc0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cc0A/T0325-2cc0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.5498e-027.74e-38
1w5qA/T0325-1w5qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1w5qA/T0325-1w5qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.0055e-023.68e-20
2c1iA/T0325-2c1iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1iA/T0325-2c1iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.3134e-021.83e-26
1xm8A/T0325-1xm8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xm8A/T0325-1xm8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1813e-018.00e-15
1zxxA/T0325-1zxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zxxA/T0325-1zxxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1899e-012.15e-23

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001