Best Alignments for T0325

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1v6tA/T0325-1v6tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v6tA/T0325-1v6tA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.4071e-043.68e-38
1ny1A/T0325-1ny1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ny1A/T0325-1ny1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0363e-036.67e-34 c.6.2.3
2c71A/T0325-2c71A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c71A/T0325-2c71A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.9198e-021.01e-28
2c1gA/T0325-2c1gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1gA/T0325-2c1gA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.2130e-021.51e-28
1k8cA/T0325-1k8cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k8cA/T0325-1k8cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.2877e-023.91e-18 c.1.7.1
2cc0A/T0325-2cc0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cc0A/T0325-2cc0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5474e-021.15e-33
2c1iA/T0325-2c1iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2c1iA/T0325-2c1iA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3676e-021.83e-26
1zxxA/T0325-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zxxA/T0325-1zxxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.1943e-011.71e-20
1xw8A/T0325-1xw8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xw8A/T0325-1xw8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4669e-014.45e-22
1gca/T0325-1gca-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gca/T0325-1gca-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.2131e-011.57e-16 1gca c.93.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001