Best Alignments for T0324

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1jud/T0324-1jud-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jud/T0324-1jud-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.5800e-239.13e-89 1qq5A c.108.1.1
2ah5A/T0324-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2ah5A/T0324-2ah5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6355e-221.02e-96
2fdrA/T0324-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fdrA/T0324-2fdrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6201e-222.24e-95
2gfhA/T0324-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gfhA/T0324-2gfhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.2426e-223.49e-96
1te2A/T0324-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1te2A/T0324-1te2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4204e-211.12e-94 c.108.1.6
1x42A/T0324-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1x42A/T0324-1x42A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.1557e-216.61e-93
2go7A/T0324-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2go7A/T0324-2go7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4170e-192.12e-96
1fezA/T0324-1fezA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fezA/T0324-1fezA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0413e-192.45e-84 1fezA c.108.1.3
2fi1A/T0324-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fi1A/T0324-2fi1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9954e-191.86e-85
1swvA/T0324-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1swvA/T0324-1swvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.5788e-191.08e-76

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001