Best Alignments for T0322

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2fs2A/T0322-2fs2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2fs2A/T0322-2fs2A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5674e-162.12e-56
1zkiA/T0322-1zkiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1zkiA/T0322-1zkiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.6087e-161.74e-58
1wluA/T0322-1wluA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wluA/T0322-1wluA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7775e-152.58e-55
1o0iA/T0322-1o0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o0iA/T0322-1o0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2943e-155.77e-61 d.38.1.5
1yliA/T0322-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yliA/T0322-1yliA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6829e-132.52e-48
1vpmA/T0322-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpmA/T0322-1vpmA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 6.5993e-132.60e-46
1yocA/T0322-1yocA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yocA/T0322-1yocA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7712e-112.68e-49
2gvhA/T0322-2gvhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2gvhA/T0322-2gvhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8104e-115.75e-42
2b6eA/T0322-2b6eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2b6eA/T0322-2b6eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0399e-101.29e-61
2cyeA/T0322-2cyeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cyeA/T0322-2cyeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3493e-102.08e-45

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001