Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vpdA/T0321-1vpdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpdA/T0321-1vpdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.3572e-022.92e-17
1vmeA/T0321-1vmeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vmeA/T0321-1vmeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3517e-011.07e-27 c.23.5.1
d.157.1.3
1xdwA/T0321-1xdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0321-1xdwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6793e-012.08e-14
1wwkA/T0321-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0321-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.7050e-013.90e-18
1v8bA/T0321-1v8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v8bA/T0321-1v8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.8813e-016.10e-19
1o4sA/T0321-1o4sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o4sA/T0321-1o4sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4358e-013.29e-24 c.67.1.1
1yqdA/T0321-1yqdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yqdA/T0321-1yqdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4035e-012.48e-15
1qmgA/T0321-1qmgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qmgA/T0321-1qmgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4143e-011.42e-17 1qmgA a.100.1.2
c.2.1.6
1y81A/T0321-1y81A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1y81A/T0321-1y81A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.6850e-019.07e-18
2g76A/T0321-2g76A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2g76A/T0321-2g76A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.7844e-014.64e-17

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001