Best Alignments for T0321

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1vpdA/T0321-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vpdA/T0321-1vpdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.9858e-038.47e-17
1v8bA/T0321-1v8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1v8bA/T0321-1v8bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.9763e-026.10e-19
1wwkA/T0321-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wwkA/T0321-1wwkA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0536e-013.90e-18
1o4sA/T0321-1o4sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o4sA/T0321-1o4sA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.4573e-013.29e-24 c.67.1.1
1qmgA/T0321-1qmgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qmgA/T0321-1qmgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0758e-013.98e-17 1qmgA a.100.1.2
c.2.1.6
1vmeA/T0321-1vmeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vmeA/T0321-1vmeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.3796e-011.07e-27 c.23.5.1
d.157.1.3
2d0iA/T0321-2d0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d0iA/T0321-2d0iA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5678e-013.02e-21
1fl2A/T0321-1fl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fl2A/T0321-1fl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.6586e-013.96e-10 1hyuA c.3.1.5
c.3.1.5
1xdwA/T0321-1xdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xdwA/T0321-1xdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.7720e-019.76e-14
1yqdA/T0321-1yqdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1yqdA/T0321-1yqdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.9010e-011.49e-14

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001