Best Alignments for T0320

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
1gpmA/T0320-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1gpmA/T0320-1gpmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6686e-201.61e-61 1gpmA c.23.16.1
c.26.2.1
d.52.2.1
1sur/T0320-1sur-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1sur/T0320-1sur-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.0575e-202.13e-79 1sur c.26.2.2
1wy5A/T0320-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wy5A/T0320-1wy5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0570e-174.89e-57
1xngA/T0320-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1xngA/T0320-1xngA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.8416e-142.28e-55
1vl2A/T0320-1vl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vl2A/T0320-1vl2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9409e-121.01e-47 c.26.2.1
d.210.1.1
1wxiA/T0320-1wxiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wxiA/T0320-1wxiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.5664e-113.10e-43
1kqpA/T0320-1kqpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1kqpA/T0320-1kqpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3066e-103.17e-37 c.26.2.1
1q15A/T0320-1q15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1q15A/T0320-1q15A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2762e-084.11e-32 c.26.2.1
d.153.1.1
2d13A/T0320-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2d13A/T0320-2d13A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6813e-076.11e-39
1jmvA/T0320-1jmvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jmvA/T0320-1jmvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.6576e-031.17e-14 c.26.2.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001